CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SULTO (Histidyl-tRNA synthetase OS=Sulfolobus tokodaii GN=hisS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17 Identity = 51/169 (30.18%), Postives = 92/169 (54.44%), Query Frame = -3 Query: 296 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSEL-WNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQR 796 DL RGL YYTG+IFE + + SIA GGRYDNL+ ++G Q PA+G ++G+ER ++E+ ++ + ++ V +L D+ L A +V +L N + + + KLI E +++ +G++E + + LKN+ T ++ I N ++ +++ Sbjct: 263 DLGFVRGLAYYTGLIFEVLHPSVSF--SIAGGGRYDNLVELYGGPQTPAIGFAIGVERTALVLEE-----PNTVKEKQNKIGVIVLSDEAILYAIRIVDKLRSNNYIATINLKSISISKLIPSYAEEGYSFLIFIGKKEYEDKTITLKNLSTKEQVTIKEENLLDYLKQ 424
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METKA (Histidyl-tRNA synthetase OS=Methanopyrus kandleri GN=hisS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17 Identity = 62/182 (34.07%), Postives = 93/182 (51.10%), Query Frame = -3 Query: 332 AKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDT-TQEEV 874 A+ AL++L AL ++ ++ D S+ARGLDYYTG++FE A GGRYD+L+ G VPAVG+++G +R+ E + + + + + G +AA+L W V+ K + K + A + + VIVGEREL EG V +KN+ T QEEV Sbjct: 234 AERALENLMEISDALREAGVDHEL--DFSVARGLDYYTGMVFEIHVPELGGGSQCAGGGRYDDLVKELGGPDVPAVGMAIGFDRLLLAAELYDRIPDGVEETRALLIPLVRSGKIWEIAAKLRKLGWVVNVEVS---GKHIRKALSLADSLEYDYAVIVGERELKEGYVSVKNLKTGVQEEV 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XYLFT (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQ---IQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F + I ++A + L D L +A L N +V+ E KK+ K A + I ++V+ G+ E G+V +K++ Q+ I R +Q L Q Sbjct: 292 NFSIARGLDYYTGTVYETALINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLFWQLRDAGLIDGIAESSVQAMVVLMDEATLDDALDIARRLRIGGINTEVQME---AKKLSKQFQYASRAGIRFVVLAGDDERARGVVAVKDLTREQQFEIPREELASTLQVELEQ 462
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XYLF2 (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain M23) GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQ---IQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F + I ++A + L D L +A L N +V+ E KK+ K A + I ++V+ G+ E G+V +K++ Q+ I R +Q L Q Sbjct: 292 NFSIARGLDYYTGTVYETALINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLFWQLRDAGLIDGIAESSVQAMVVLMDEATLDDALDIARRLRIGGINTEVQME---AKKLSKQFQYASRAGIRFVVLAGDDERARGVVAVKDLTREQQFEIPREELASTLQVELEQ 462
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANOR (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=hisS PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 56/184 (30.43%), Postives = 97/184 (52.72%), Query Frame = -3 Query: 284 EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 829 E++ C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + +L ++ L A + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R + L Q Sbjct: 289 ERAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRLDDVLDIARRLRIAGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLLVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANOP (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 56/184 (30.43%), Postives = 97/184 (52.72%), Query Frame = -3 Query: 284 EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 829 E++ C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + +L ++ L A + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R + L Q Sbjct: 289 ERAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRLDDVLDIARRLRIAGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLLVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANOM (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 56/184 (30.43%), Postives = 97/184 (52.72%), Query Frame = -3 Query: 284 EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 829 E++ C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + +L ++ L A + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R + L Q Sbjct: 289 ERAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRLDDVLDIARRLRIAGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLLVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THEFY (Histidyl-tRNA synthetase OS=Thermobifida fusca (strain YX) GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = -3 Query: 407 VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWM 805 VV DLS+ARGLDYYTG ++EA F GSI AGGRY+NL G F + +P VG+S+G+ R+F + + + R R T VLV L D+ L +AA+L +N +V Y K+ K I A + IP++ Sbjct: 275 VVADLSIARGLDYYTGTVYEATFNDDPGYGSICAGGRYENLAGQFIRRSLPGVGISIGLTRIFA--KLVSEGRITGGRFCPTDVLVVLPSDERRSAALAVAAQLRERGFNTEV---YHQAAKIGKQIQYAVKKDIPFV 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRAW (Histidyl-tRNA synthetase OS=Streptomyces avermitilis GN=hisS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 54/171 (31.58%), Postives = 90/171 (52.63%), Query Frame = -3 Query: 290 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHKKVMK-LIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 796 D L RGLDYYT FE + G ++ GGRYD L M G +P+VG +LG++R +E E ++ + T V LG++ + V+EL + A++ K +K + A S + V+ GER+L EG+V+LK++++ ++ + + V E++ RL Sbjct: 252 DAKLVRGLDYYTRTTFEFVHDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVDRTVLALE---AEGVELELPSSTSVFAVPLGEEARRILFAKVTELRKVGIAADFAYGGKGLKGAMKNANRSGARYTVVAGERDLAEGVVQLKDMESGEQTAVGVNEIVAELEARL 419
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH2_BACSK (Histidyl-tRNA synthetase 2 OS=Bacillus clausii (strain KSM-K16) GN=hisS2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.168e-16 Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = -3 Query: 335 DLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLI-GMFGTKQ-VPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 856 +L+ +AL + F+ LARGL+ YTG ++E S+ +GGRYD I G+ G +Q +P VG+S GI+ ++T ++ ++ NQ + ++ L K LA +V E+ +KK+ K +DRA + KIP+++++GE E+ G KLKN++T E+ Sbjct: 248 ELQELEEALRYLNIDSQCTFNPFLARGLEIYTGTVYELFLTEGAIQSSVGSGGRYDQAISGLTGEEQPMPTVGISFGIDVIYTALK-MEGRINQ--KPLLDYYVIPLQKQKEALAVASSLRKQGFRVDVEFK-NKKLTKALDRANKEKIPFVILIGEEEVASGRYKLKNMETGAEQ 419 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |