CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FUSNN (Histidyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=hisS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16 Identity = 53/172 (30.81%), Postives = 88/172 (51.16%), Query Frame = -3 Query: 299 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHKKVMKL-IDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 808 K D +L RGLDYY+ +FE + G++ GGRYDNL+ G K +PAVG + G+ER+ ++E+ + V + LG+ A ++ L + +K +K MK + +A + + + VI+GE E N+GIV LK+ T +++ I + I+ Sbjct: 249 KYTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLEENYPKNT-------PDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLETRYCVILGEDEFNKGIVLLKDFSTREQKEIKIEEIINYIK 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ANASP (Histidyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=hisS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16 Identity = 60/202 (29.70%), Postives = 105/202 (51.98%), Query Frame = -3 Query: 290 ENSSAKLALDDLEIFFQALEKSKCIDK-VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHKKVM-KLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 886 E+ L + +LE + DK DL++ARGL+YYTG ++E G +GSI +GGRY+ L+G F +++P VG+S+G+ R+ I ++ + T QV+V + D+L P ++ +L A + K+ + K A + I + VI+G E LK++ + ++ ++ ++ EEI+RRL Sbjct: 262 ESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTGTVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRL--ISRLLKAGILNTLPPTPAQVVVVNMQDELMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVALADLAEEIKRRL 461
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XYLFA (Histidyl-tRNA synthetase OS=Xylella fastidiosa GN=hisS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.993e-16 Identity = 57/177 (32.20%), Postives = 91/177 (51.41%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF------TIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F +M+ I + ++A + L D L +A L N +V+ E KKV K A + I ++V+ G+ E G+V +K++ Q+ I R +Q L Q Sbjct: 292 NFSIARGLDYYTGTVYETSLINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLFWQLRDAGVMDGIAESS---VQAMVVLMDEATLDDALDIARCLRIGGINTEVQME---AKKVSKQFQYASRAGIRFVVLAGDDERARGVVAVKDLTREQQFEIPREELASTLQVELEQ 462
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XYLFM (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain M12) GN=hisS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16 Identity = 57/177 (32.20%), Postives = 91/177 (51.41%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF------TIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F +M+ I + ++A + L D L +A L N +V+ E KKV K A + I ++V+ G+ E G+V +K++ Q+ I R +Q L Q Sbjct: 292 NFSIARGLDYYTGTVYETSLINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLFWQLRDAGLMDGIAESS---VQAMVVLMDEATLDDALDIARCLRIGGINTEVQME---AKKVSKQFQYASRAGIRFVVLAGDDERARGVVAVKDLTREQQFEIPREELASTLQVELEQ 462
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METMP (Histidyl-tRNA synthetase OS=Methanococcus maripaludis GN=hisS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16 Identity = 64/188 (34.04%), Postives = 98/188 (52.13%), Query Frame = -3 Query: 329 KLALDDLEIFFQALEKSKCI-----DKVVFDLSLARGLDYYTGVIFEAIFK--GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 871 K L D E ALE I V + +ARGLDYYTG++FE K GA QV GGRYDNLI +F + PAVG + G +R+ ++ + E N+ I + LL + L +A L + +V ++ +K+ K ++ A I ++IVGE ++ +G V LKN++T ++ +I Sbjct: 228 KEKLADFESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAKQV---CGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVE-NESIFVVPVKSSEMLLKECLKIAKTLRDSGKSVEVD---LMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNMETGEQSLI 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_META3 (Histidyl-tRNA synthetase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=hisS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16 Identity = 59/186 (31.72%), Postives = 106/186 (56.99%), Query Frame = -3 Query: 329 ALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFK--GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-----AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 865 AL++LE + ++++ I +L +ARGLDYYTG++FE K GA QV GGRYDNLI +F PAVG + G +R+ ++ + E +I+ +V + DK L A+ + E+ K+ ++++K+ K ++ A I ++++GE+ELNE + +K+++T ++++I Sbjct: 241 ALNNLEEIMEFVKRNNYI----INLGIARGLDYYTGMVFEVYGKKEGARQV---CGGGRYDNLIELFEGAPTPAVGFAYGFDRIMLNIDDFEVEDKRIL-------IVPIKKDKKLLKECLIIADKLREM--EKIVEVDLMNRKLNKALNYANTVGISKVIMIGEKELNERKISIKDMETGEQKLI 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRCO (Histidyl-tRNA synthetase OS=Streptomyces coelicolor GN=hisS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16 Identity = 58/176 (32.95%), Postives = 94/176 (53.41%), Query Frame = -3 Query: 290 VVF--DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHKKVMK-LIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 805 VVF D L RGLDYYT FE + G ++ GGRYD L M G +P+VG +LG++R +E E ++ + T V LG++ + V+EL V A++ K +K + A S + +++GER+L EG+V+LK++++ ++ I + V E++ RL Sbjct: 252 VVFEDDPKLVRGLDYYTRTTFEFVHDGLGSQSAVGGGGRYDGLSEMIGGPSLPSVGWALGVDRTVLALE---AEGIELDIPSATSVFAVPLGEEARRILFAKVTELRKNGVAADFSYGGKGLKAAMKAANRSGARYTLVLGERDLAEGVVQLKDMESGEQTAIGVNEIVAELESRL 424
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEON (Histidyl-tRNA synthetase OS=Shewanella oneidensis GN=hisS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16 Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = -3 Query: 335 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 787 L RGLDYY +FE + G++ AGGRYD L+ G K+ PAVG ++G+ER+ ++E + ++ E V V +GD L A ++ EL +A M H + K + RA +S +++GE EL EG+V +K + E+ Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKETPAVGFAMGLERIVLLLETLALTQD---IPAEVDVYVAAMGDNCLVEAIKVAQELRSALPTLRVMSHCGGGNLKKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQ 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEFN (Histidyl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hisS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16 Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE-EVISRSNFVEEI 787 L RGLDYY +FE + G++ AGGRYD L+G G K PAVG ++G+ER+ ++E ++ + A E V V +G+ + +A EL +L KV + + K + RA +S + +I+GE E+ V +K + T E ++++RS V +I Sbjct: 257 LVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVGQLGGKDTPAVGFAMGLERIVLLLETLELTSD---IAPEVDVYVTAMGENCVVEAIKVAQELRQQLPTLKVMS-HCGGGNFKKQMKRADKSGAQFALIIGENEIANNQVAIKPLRTNNEQQLVTRSELVAKI 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HELPJ (Histidyl-tRNA synthetase OS=Helicobacter pylori J99 GN=hisS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16 Identity = 52/180 (28.89%), Postives = 91/180 (50.56%), Query Frame = -3 Query: 353 NSSAKLALDDLEIFFQALEKSKCIDKVV-FDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 883 N + K + DLE +Q L + + D S+ARGL YYTG+++E +GS+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ + ++ A L L + + +E Y +K+ K A ++ ++GE E + LKN+ Sbjct: 241 NENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGIVYETTLNDMKSLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAVIGEEEFKSETLSLKNM 417 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |