CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHESR (Histidyl-tRNA synthetase OS=Shewanella sp. (strain MR-7) GN=hisS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16 Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = -3 Query: 335 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 787 L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E + E Q I A V V +GD L A ++ EL + M H K I RA +S +++GE EL EG+V +K + E+ Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETL--ELTQDIPAA-VDVYVAAMGDSCLVEAIKVAQELRSTLPTLRVMSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQ 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHESM (Histidyl-tRNA synthetase OS=Shewanella sp. (strain MR-4) GN=hisS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16 Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = -3 Query: 335 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 787 L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E + E Q I A V V +GD L A ++ EL + M H K I RA +S +++GE EL EG+V +K + E+ Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETL--ELTQDIPAA-VDVYVAAMGDSCLVEAIKVAQELRSTLPTLRVMSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQ 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHESA (Histidyl-tRNA synthetase OS=Shewanella sp. (strain ANA-3) GN=hisS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16 Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = -3 Query: 335 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 787 L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E + E Q I A V V +GD L A ++ EL + M H K I RA +S +++GE EL EG+V +K + E+ Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETL--ELTQDIPAA-VDVYVAAMGDSCLVEAIKVAQELRSTLPTLRVMSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQ 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SILPO (Histidyl-tRNA synthetase OS=Silicibacter pomeroyi GN=hisS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = -3 Query: 353 DKVVFDLSLARGLDYYTGVIFEA-----IF--KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG-DKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 811 D++V D S+ RGL YYTG ++EA IF KG Q GS++ GGRYD+L+ F ++VPA GVS+G++R+ + +E+ +I A V+V ++ D++ +V+EL NA ++AE + K + A + P VI G E G+V++K++ Sbjct: 294 DRIVIDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAAL----REKGRIRTAERGPVVVTVMDRDRMADYQAMVAELRNAGIRAEVYLGNPKNFGNQLKYADKRNSPVAVIEGGDERANGVVQIKDL 453
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PSEHT (Histidyl-tRNA synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hisS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = -3 Query: 332 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKV-KAEYMVHK---KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEV 808 K + L RGLDYY +FE I G++ AGGRYD L+ G K PAVG ++G+ER+ +++ ++ + IR V + +GDK + A +++ V MVH K + RA +S VI+GE EL +G+V +K + +E+V Sbjct: 250 KYTINEKLVRGLDYYNRTVFEWITDSLGAQGTVCAGGRYDGLVEQLGGKATPAVGFAMGLERLVLLLQALECVGD--IR-RNADVYLASMGDKASIQAPIIAATLRRDVPNLRVMVHAGGGNFKKQLKRADKSDALVAVIIGEDELEQGVVTIKYLRERKEQV 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METM7 (Histidyl-tRNA synthetase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=hisS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = -3 Query: 329 SSAKLALDDLEIFFQALEKSKCI-----DKVVFDLSLARGLDYYTGVIFEAIFK--GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 880 S K L + E ALE I + + + +ARGLDYYTG++FE K GA QV GGRYDNLI +F + PAVG + G +R+ ++ + E I + LL + L +A L K ++ +K+ K ++ A I ++IVGE ++ EG V LKN++T ++ +I Sbjct: 227 SKLKEKLAEFESSIAALENLDSILEFVPHEYIINFGIARGLDYYTGMVFEIYGKREGARQV---CGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVEEESIF-VVPVKSSDMLLNECLKIAKTLREA---GKAVELDLMGRKLNKALNYANTKGIKKVIIVGENDILEGKVALKNMETGEQSLI 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLOTH (Histidyl-tRNA synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=hisS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15 Identity = 57/195 (29.23%), Postives = 102/195 (52.31%), Query Frame = -3 Query: 299 DDLEIFFQALE---KSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQ---VLVGLLGDKLPLAAE-LVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 859 DD + F+ L+ ++ ID + D ++ RGLDYYT +FE + G++ GGRYD L+ G K P +G ++G+ER+ +ME NQ I+ E++ + + +GDK AE +V EL + AE ++ K + + A + + + +G+ E+ G LKN++T +++ IS + ++ Sbjct: 229 DDCKNHFEGLKAGLENLGIDYKI-DKNIVRGLDYYTKTVFEFVSDNIGAQGTVCGGGRYDGLVEACGGKPTPGIGFAMGLERLLMVME------NQGIKFPESKKPDIFIAAIGDKANSYAEKMVYELRKEGLSAEKDLMGKSLKAQMKYADKLGAKYSIALGDDEIESGKAVLKNMETGEQKEISLDTLISRLK 416
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METM6 (Histidyl-tRNA synthetase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=hisS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15 Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = -3 Query: 329 SSAKLALDDLEIFFQALEKSKCI-----DKVVFDLSLARGLDYYTGVIFEAIFK--GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 880 S K L + E ALE I + + + +ARGLDYYTG++FE K GA QV GGRYDNLI +F + PAVG + G +R+ ++ + E I + LL + L +A L K ++ +K+ K ++ A I ++IVGE ++ EG V LKN++T ++ +I Sbjct: 227 SKLKEKLSEFESSVTALENLDSILEFVPHEYIINFGIARGLDYYTGMVFEIYGKREGARQV---CGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVEEESIF-VVPVKSSDMLLNECLKIAKTLRDA---GKAVELDLMGRKLNKALNYANTKGIKKVLIVGENDILEGKVALKNMETGEQSLI 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SILST (Histidyl-tRNA synthetase OS=Silicibacter sp. (strain TM1040) GN=hisS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15 Identity = 63/187 (33.69%), Postives = 102/187 (54.55%), Query Frame = -3 Query: 284 DKVVFDLSLARGLDYYTGVIFEA-----IF--KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG-DKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 811 D+++ D S+ RGL YYTG +FEA IF KG Q GS+A GGRYD L+ F ++VPAVG+S+G++R+ + +E+ ++ V+V ++ D++ +V+EL A ++AE + K + A + P VI G E + G+V++K D I+ S +EE + R +Q Sbjct: 295 DRILIDPSIVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDGLVKRFTGQEVPAVGLSIGVDRLLAAL----REKGRLAATPTGPVVVTVMDRDRMADYQAMVAELRQAGIRAEVYLGNPKNFGNQLKYADKRHSPIAVIEGGDEKDRGVVQIK--DLILGAKIAESATLEEWKERPSQ 475
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHESW (Histidyl-tRNA synthetase OS=Shewanella sp. (strain W3-18-1) GN=hisS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15 Identity = 57/171 (33.33%), Postives = 93/171 (54.39%), Query Frame = -3 Query: 296 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV---GLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI--DTTQEEVI--SRSNFVEEIQR 787 L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E + ++ I A + V L + + +A EL S L + KV + + V K + RA +S +++GE EL EG+V +K++ D Q++V + S F+ E+ + Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLGLTQD-IPAAVDVYVTAMGENCLVEAIKVAQELRSALPHLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEEELAEGMVTVKHLRNDNEQQQVARNALSAFLAELTK 425 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |