CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_AZOPC (Histidyl-tRNA synthetase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=hisS PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.720e-44 Identity = 110/285 (38.60%), Postives = 168/285 (58.95%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAM--NGLT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD 872 LRYDLT+P AR+V M N +T FKR QI V+R D P KGRYREF QCD DI G + + + E+++I+ E+ + L I IK+N+R +L+G+ EI +K I +++DKLDK ++ +E++ +KG+S++ D++ F +GS +S L+ ++ + L ++E +F L + + FDL+LARGL+YYTG IFE +GS+ GGRYDNL +FG + VG+S G +R+F I+ Q+ N A+ TQ+L LG+ Sbjct: 98 LRYDLTLPLARFVVMHRNEITFPFKRFQIQPVWRSDRPQKGRYREFVQCDADIVGS-DSLLNEVELIQIIDEVFHRLSI-SISIKINNRKILNGIAEIIS-EEKKITDITTAMDKLDKVGLTKVNEELL-QKGISIQAIDQLQPFFLLKGSNQNKISTLK---NILSTSPIGIKGLQEIETIFNKLNLIPTRNTIKFDLTLARGLNYYTGTIFEVKCLN-VPIGSVLGGGRYDNLTNIFGLSNLSGVGISFGADRIFDILNQLNLYPN--TNASHTQILFVNLGE 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_GRAFK (Histidyl-tRNA synthetase OS=Gramella forsetii (strain KT0803) GN=hisS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.934e-44 Identity = 99/265 (37.36%), Postives = 158/265 (59.62%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKC-IDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 806 +LRYDLTVPFARYV + FKR+QI V+R D P KGR+REF+QCD D+ G + + E V++ + N+L + IK+N+R +L G E+ G +K ++DKLDK E +KKEM EKG+S E ++I G+ K+ ++ + + + +++L+ + A+E+ + K+ D++LARGL+YYTG IFE ++GSI GGRYD+L G+FG K + +G+S G++R++ ++E++ Sbjct: 98 ALRYDLTVPFARYVVQHQNEIEFPFKRYQIQPVWRADRPQKGRFREFFQCDADVVGS-NSLWQEVEFVQLYDAVFNKLGLEGVTIKINNRKVLSGFAEVIG-EQDKLIDFTVALDKLDKIGEEGVKKEM-REKGISEEALNKIQPIFNLNGN---FAEKIEGLKTILEGSETGQKGIEELQFIQNAIEEMPLSVAKLDLDVTLARGLNYYTGAIFEVAAPENVKMGSIGGGGRYDDLTGIFGLKDMSGIGISFGLDRIYLVLEEL 356
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BACFR (Histidyl-tRNA synthetase OS=Bacteroides fragilis GN=hisS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.934e-44 Identity = 108/280 (38.57%), Postives = 162/280 (57.86%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLS-----KLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATE 842 LRYDLTVPFARYV M+ FKR+QI V+R D P KGRYREFYQCD D+ G + + E+++I+ + I IK+N+R +L G+ EI G ++K I +IDKLDK + + KE+ E KG+S E ++ P++LLS KL ++ ++ + +++ E + L+ +++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG V VG+S G +R+F ++ Q++ + + T+ Sbjct: 99 LRYDLTVPFARYVVMHRDEITFPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLN-EVELMQIVDTVFTRFGIRVC-IKINNRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNKELAE-KGISEEAIAKL--------QPIILLSGTNTEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQ 365
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BACFN (Histidyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=hisS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.832e-44 Identity = 108/280 (38.57%), Postives = 162/280 (57.86%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLS-----KLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATE 842 LRYDLTVPFARYV M+ FKR+QI V+R D P KGRYREFYQCD D+ G + + E+++I+ + I IK+N+R +L G+ EI G ++K I +IDKLDK + + KE+ E KG+S E ++ P++LLS KL ++ ++ + +++ E + L+ +++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG V VG+S G +R+F ++ Q++ + + T+ Sbjct: 99 LRYDLTVPFARYVVMHRDEITFPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLN-EVELMQIVDTVFTRFGIRVC-IKINNRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNKELAE-KGISGEAIAKL--------QPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQ 365
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_HELHP (Histidyl-tRNA synthetase OS=Helicobacter hepaticus GN=hisS PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43 Identity = 106/293 (36.18%), Postives = 168/293 (57.34%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMN----GLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEK-FRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRI--GTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCI-DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 D GG +LR+DLTVP AR+V+ GL FKR+ I V+R + +GRYREF QCDFD G + + D E+++++ L +L I ++ I LNHR +L+G+ E CG+ EK IDKLDK E++ +E+ +E GL+ + + T +K++G S RQ + N S K ++DL++L++ L + D + S+ARGL YYTG+++E +GS+ +GGRYDNL F +++ VG S+GI+R+ +E+++ + RAT + L+ Sbjct: 70 DHGGRDVALRFDLTVPLARFVSQYKNEVGLP-FKRYAIGNVFRGERAQRGRYREFTQCDFDFIGS-DSISCDAEILQVIYASLMKLGIEEFTIWLNHRSILNGICEYCGITQEKDINVALRIIDKLDKIGKERVSEELQKELGLNNNQVENLLEYTSIKQQGESE---SFFRQISFMEEWNDSIKKGIEDLKMLYEVLSSLQMDRDTYRVNFSIARGLGYYTGIVYETTLNALKSIGSVCSGGRYDNLTRTFSKEKMSGVGASIGIDRLLAALEELELLQK---RATSARALI 354
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_FLAJ1 (Histidyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=hisS PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43 Identity = 99/266 (37.22%), Postives = 155/266 (58.27%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVV-FDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQ 809 +LRYDLTVPFARYV + FKR+QI V+R DNP KGR+REF+QCD D+ G + + + E+V++ + L + IK+N+R +L G+ E+ G S+K ++DKLDK + +KKEM+E KG+S + ++ G+ K+ Q L + +++L+ + + V+ D++LARGL+YYTG IFE +GSI GGRYD+L G+FG K + VG+S G++R++ ++E++Q Sbjct: 116 ALRYDLTVPFARYVVQHQSEIEFPFKRYQIQPVWRADNPQKGRFREFFQCDADVVGS-KSLWQEVELVQLYDTVFTSLGLEGVTIKINNRKILSGIAEVIGA-SDKLIDFTVALDKLDKIGEDGVKKEMIE-KGISEDALVKVQPLFNFSGT---FADKIAQLSDLLSSSEEGMKGVEELKFICDNVADLGLSTAVLDLDVTLARGLNYYTGAIFEVAAPKTVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVLEELQ 375
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BACV8 (Histidyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=hisS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43 Identity = 109/280 (38.93%), Postives = 159/280 (56.79%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEG----SLFLENSSAKL-ALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATE 842 LRYDLTVPFARYV M+ FKR+QI V+R D P KGRYREFYQCD D+ G + + E+V+++ + + + IK+N+R +L G+ EI G ++K I +IDKLDK E + E+ KG+ E D++ P++LLS +E L S A L +++ E + + + +V DL+LARGL+YYTG IFE + Q+GSI+ GGRYDNL G+FG + VG+S G +R+F ++ Q+ + + TE Sbjct: 99 LRYDLTVPFARYVVMHRDEISFPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLN-EVELVQMIDRVFGKFGVR-VSIKINNRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLENVNAELAS-KGIPQEAIDKL--------QPIILLSGSNEEKLETLKTVLATSEAGLKGVEESEFILKTVSALGVKSEVELDLTLARGLNYYTGAIFE-VKALDVQIGSISGGGRYDNLTGVFGMDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTE 365
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PORGI (Histidyl-tRNA synthetase OS=Porphyromonas gingivalis GN=hisS PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.902e-43 Identity = 102/263 (38.78%), Postives = 156/263 (59.32%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 806 LRYDLTVPFARYV M+ FKR+QI V+R D P KGRYREFYQCD D+ G M + E+++I++E+ L I I LN+R +L G+ E+ +++ I +IDKLDK +++ E+ KG E +R+ F++ +G L +L+ S + + +++L + +E+ + +++ D+SLARGL YYTG I E A ++GSI GGRYDNL G+FG + + VG+S G +R++ +M Q+ Sbjct: 98 LRYDLTVPFARYVVMHRNEINFPFKRYQIQPVWRADRPQKGRYREFYQCDGDVIGSDSLMN-EVELIQIISEVFRRLGIRT-RILLNNRKILSGIAEVVD-EADRLTDITVAIDKLDKIGLDKVNDEL-RTKGFGEEAIERLRPFIEMKGDNREKLDRLK---SALASSETGLKGIEELTYILDKVERVQLHSELMVDISLARGLSYYTGAILEVKALDA-EMGSITGGGRYDNLTGIFGLEGMSGVGISFGADRIYDVMMQL 352
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_KORCO (Histidyl-tRNA synthetase OS=Korarchaeum cryptofilum (strain OPF8) GN=hisS PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.484e-43 Identity = 110/259 (42.47%), Postives = 148/259 (57.14%), Query Frame = 3 Query: 15 ELCSLRYDLTVPFARYVAMNGLTS--FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERV 785 E +LRY+LT P ARYVAM+ T FKR+ I V+R + P KGRYREF QCD DI G D EV+ + + + D ++ ++LN R LL G+ E + F I +IDKLDK + +K E+ G RI + RGS + + R+ +EN K+ALD LE +F + D++VFDLSL RGLDYYTG +FE ++GS+A GGRYD LIG++ K VPA GVSLG+ER+ Sbjct: 72 EWYTLRYELTFPLARYVAMHPETPLPFKRYHIGNVWRHEEPQKGRYREFLQCDADIVGS-PYPEADAEVISVNIDAMKSFDFENFRVRLNDRRLLTGVFEEELGINNPF-PIYRAIDKLDKIGVDGVKGELAR-LGAHESLIGRIMELISTRGSFNEISNTFRR-----IENDKVKVALDHLEEIFSIVSD----DRLVFDLSLVRGLDYYTGPVFETSVS-EPRIGSLAGGGRYDRLIGLYSGKDVPATGVSLGVERL 317
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_FINM2 (Histidyl-tRNA synthetase OS=Finegoldia magna (strain ATCC 29328) GN=hisS PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.236e-43 Identity = 98/265 (36.98%), Postives = 159/265 (60.00%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAM---NGLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQ-ALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 806 LR+DLTVP A+YV+M + F+R+QIAKVYR + KGRY+EFYQCD DI G + + D E+VK + E L +D+ ++E + N+R +L+G G+ + F + IDKLDK + +K+E+ + L D + F++ G+ ++ KL SL ++N +++L+ ++Q L + + +LS+ RGLDYYTG +FE FK ++GSI +GGRYD+L F ++P VG+S+G+ R+F ++++ Sbjct: 75 LRFDLTVPLAKYVSMYMQDLAFPFRRYQIAKVYRGERNQKGRYKEFYQCDIDIIGNEKLSLYNDAEIVKCMYEALKSIDVPEFEFQFNNRKILNGYFSYLGI--DDFESCLRVIDKLDKIGIDNVKEEL-SKINLDASKIDTLLKFLEIDGTNQEIIEKLE---SLNIDNELFTCGVNELKFVYQDILSLGVNPENIKINLSITRGLDYYTGSVFETFFKDYREIGSICSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQEL 333 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |