CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_AERPE (Histidyl-tRNA synthetase OS=Aeropyrum pernix GN=hisS PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 4.236e-43 Identity = 108/260 (41.54%), Postives = 151/260 (58.08%), Query Frame = 3 Query: 12 GELCSLRYDLTVPFARYVAMN-GLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERV 785 G +LRYDLTVP AR+VA N GL FKR+ I KV+R + P KGRYREF QCD DI G D E+V + + ++ L + + +++N R LL G+ E + + I +IDKLDK E +++E+ E GL T +RI + RG P +L +R+ + N + ALD LE + + + V D+SL RGLDYYTG I E + ++GS+A GGRYD L+GMF + +PA GVS+GIER+ Sbjct: 75 GRWYALRYDLTVPLARFVASNPGLPMPFKRYHIGKVWRHEEPQKGRYREFVQCDADIVGS-PYPEADAEIVSLAVDSIDALGLPGFRVRVNDRRLLAGVFEE-ELGFDNPLPIYRAIDKLDKIGVEGVRREL-ERLGLPGSTVERIMEIISWRGRPGEVLESVRRG---YGSNEKVREALDHLEEMLSLADDKR----VELDMSLVRGLDYYTGPILEVVLD-EPRIGSVAGGGRYDGLVGMFAGRDIPATGVSIGIERI 323
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_CYTH3 (Histidyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hisS PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.226e-43 Identity = 108/288 (37.50%), Postives = 165/288 (57.29%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDN 875 +LRYDLTVPFAR+V MN FKR+QI V+R D P KGRY EF QCD D+ G + + + E+V ++ E L I D+ +K+N+R +L G+ + G + +C +IDKLDK E + +E+ + KG + R+ +G+ + LR ++ ++S +D+LE +F +EKS + + DL+LARGL YYTG IFE Q+GS+ GGRYDNL G+FG V VG+S GI+R++ +M ++ +Q + T++L+ +N Sbjct: 96 ALRYDLTVPFARHVVMNRNDITFPFKRYQIQPVWRADRPQKGRYCEFMQCDADVVGT-DSLLCEAEIVLMIHEAFAALGITDFVVKINNRKILSGIADAIGKEGSEAE-LCVAIDKLDKIGKEAVLEEL-KTKGFTDSQLTRLLPVFDLKGNNAEIFPLLR---TILAQSSVGLKGIDELEKVFTLIEKSGLGNASIETDLTLARGLSYYTGAIFEVKILNV-QMGSVCGGGRYDNLTGVFGLPNVSGVGISFGIDRIYDVMNELNLFPSQ--ESNSTRLLICAFDEN 374
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PARD8 (Histidyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.233e-42 Identity = 104/275 (37.82%), Postives = 163/275 (59.27%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAM--NGLT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATE 842 LRYDLTVPFARYV N ++ FKR+QI V+R D P KGRYREFYQCD D+ G + + + E+++I+ E+ + I IK+N+R +L G+ EI G ++K I +IDKLDK + + +E+ KGL E +R+ + +GS ++ L++ + + + + +L+ + + + + ++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG + V VG S G +R+F ++ Q+ ++ T+ Sbjct: 98 LRYDLTVPFARYVVQHRNEISFPFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGS-DSLINEVELIQIMDEVFHRFGIRVC-IKMNNRKILSGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNEEL-RSKGLPEEAIERLQPIIMLQGSNQEKIATLKK---VLSASETGLKGVAELDFILERISHTSIRAELELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQ 364
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_CLOTE (Histidyl-tRNA synthetase OS=Clostridium tetani GN=hisS PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.586e-42 Identity = 104/295 (35.25%), Postives = 171/295 (57.97%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDK-VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD 872 ++G SLR+DLTVP ARYV+ + F+R+ I+KV+R + KGR+REFYQCD DI G + D E+ I+ + EL D+ I++N+R +L+G E G E + + +IDK++K + ++KE+ +E GL D+I F+ +G+ ++ L++ L +EN K + +LE + ++ DK DL++ARGLDYYTG ++E + Q+GS+ +GGRYDNL + +++P VG+S+G+ R+F + + K + +T +Q LV +GD Sbjct: 71 NKGNTDLSLRFDLTVPLARYVSQHFSDLNFPFRRYHISKVFRGERNQKGRFREFYQCDIDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFE--GTDVEDRKGVLRAIDKIEKIGEDGVRKEL-QELGLEDSKIDKIINFINIKGTKSEVIKSLKE---LDIENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTIARGLDYYTGTVYETVLNNYPQIGSVCSGGRYDNLAEHYTNQKLPGVGISIGLTRLFYQLRE-AKIIGENASSTLSQALVIPVGD 358
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_GLOVI (Histidyl-tRNA synthetase OS=Gloeobacter violaceus GN=hisS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.117e-42 Identity = 108/282 (38.30%), Postives = 155/282 (54.96%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNG-----------------LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVF--DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQI 806 +LRYDLTVP AR V M G FKR+QI V+R D P +GRYREF+QCD D+ G + + E++ + E L D+ +K+NHR LL G++E G+ K T+ +SIDKLDK E+++ E+ KGL+ + D + + G+ +L R SL + +A+ + +L L LE + +D + DL+LARGLDYYTG IFE + A +VGS+ AGGRYD LI G +PA G S G++R+ M+Q+ Sbjct: 84 ALRYDLTVPLARVVGMYGDQMVADPADPKKQTRRLPRPFKRYQIQPVWRGDRPGEGRYREFHQCDADVVGSTSPL-VETELIALTVEAFKALGFADFTVKINHRQLLKGLIEQAGIAPTKEATVLTSIDKLDKLPPEKVRLELA-GKGLNADQLDALFQVIALEGTSEQVLEGAR---SLLAGSEAAQRGIGELTKLLHYLE-ALGVDSAYYRIDLALARGLDYYTGTIFETV--SAAKVGSVGAGGRYDRLIYDLSGGKADLPACGTSFGLDRILAAMDQL 357
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_WOLSU (Histidyl-tRNA synthetase OS=Wolinella succinogenes GN=hisS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.043e-41 Identity = 109/303 (35.97%), Postives = 166/303 (54.79%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMN----GLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFV---KERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILF---QALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 D GG +LR+D TVP AR+++ + GL FKR+ I V+R + +GRYREF QCDFD G E +G D E+++++ L L I + I +N+R +L+G+ + GV E+ + IDKLDK E + KE+VEE GLS E+A I F +ER S EG + S + + ++ L+ LE + K+ F S+ARGL YYTG+++E +GS+ +GGRYDNL F +++ VG S+G++R+ +E++ R T QVLV + ++ L Sbjct: 73 DHGGRDVALRFDQTVPLARFISQHRNALGLP-FKRYAIGNVFRGERAQRGRYREFTQCDFDFIGS-ESIGSDAEIIQVIYASLKALGIERFTISMNNRKILNGICDYFGV-KEQTSDVLRIIDKLDKIGEESVIKELVEELGLSQESARGILGFTSLKQERSSEEFFAKVASYEGL----SDSLREGMGEMRALYAILDTLEMDRACYKINF--SIARGLGYYTGIVYETTLDALPSIGSVCSGGRYDNLTQSFSKERMSGVGASIGVDRLLAALEELGLLEG---RGTSAQVLVACMEESQL 363
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_HELPS (Histidyl-tRNA synthetase OS=Helicobacter pylori (strain Shi470) GN=hisS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.325e-41 Identity = 99/296 (33.45%), Postives = 162/296 (54.73%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVV-FDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNF 878 D G +LR+DLTVP AR+V+++ T FKR+ I V+R + KGRYREF QCDFD G E + D E+++++ L LD+ D+ I +NHR +L+G+ E GV + +DKL+K +++E+ +E L + T + V+ + + L + L N + K + DLE L+Q L + + D S+ARGL YYTG+++E G +GS+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ + + + Sbjct: 68 DHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYREFTQCDFDFIGS-ESLVCDAEIIQVIVASLKALDLEDFCISINHRKILNGICEYFGV--SQVNEALRIVDKLEKIGLNGVEEELKKECDLDLNTIKELLEMVQIKQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGIVYETTLNGMKSLGSVCSGGRYDHLTQNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMHEEY 357
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_HELPY (Histidyl-tRNA synthetase OS=Helicobacter pylori GN=hisS PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.154e-40 Identity = 96/296 (32.43%), Postives = 162/296 (54.73%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVV-FDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNF 878 D G +LR+DLTVP AR+V+++ T FKR+ I V+R + KGRYREF QCDFD G E + D E+++++ L LD+ D+ + +NHR +L+G+ E G+ + +DKL+K +++E+ +E GL+ T + ++ + + L + L N + K + DLE L+Q L + + D S+ARGL YYTG+++E +GS+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ + + + Sbjct: 68 DHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYREFTQCDFDFIGS-ESLVCDAEIIQVIVASLKALDLEDFCVSINHRKILNGICEYFGI--SQVNEALRIVDKLEKIGLNGVEEELKKECGLNSNTIKELLELIQIKQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGIVYETTLNEMKSLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMHEEY 357
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_NOSP7 (Histidyl-tRNA synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hisS PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.570e-40 Identity = 97/290 (33.45%), Postives = 166/290 (57.24%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVA--MNGLT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 857 + G E +L++D TVP A Y+A +N L F R+Q V+R + GR+R+F QCD D+ + E + D ++ I+TE+ ++IGD+ I++N+R +L G + G+ +K ++ + +D L+K ++K+E+ E++G+S E +I F+K GS +L KL+ E L + +LE + + + + DLS+ARGLDYYTG ++E G +GSI +GGRY+ L+G+F +++P VG+S+G+ R+ I ++ + AT QV+V Sbjct: 95 ETGSEARALKFDQTVPLAAYIARHLNELIFPFARYQTDMVFRGERAKDGRFRQFRQCDIDVVARRELSLLYDAQMPAIITEIFEAINIGDFLIRINNRKVLTGFFKSVGITEDKIKSCINIVDNLEKIGESKVKQEL-EKEGVSGEQTQKIIDFIKIDGSVDEVLDKLKHLTLNLPETEQLSLGISELETVIAGVRNLGVTENRFCIDLSIARGLDYYTGTVYETTLLGHEALGSICSGGRYEELVGVFLGEKMPGVGISIGLTRL--ISRLLKAGILSTLAATPAQVMV 381
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_ANASP (Histidyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=hisS PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.478e-40 Identity = 93/268 (34.70%), Postives = 157/268 (58.58%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVA--MNGLT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDK-VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFT 791 D G E +L++D TVP A Y+A +N LT F R+Q+ V+R + GR+R+F QCD D+ G+ + + D ++ I+TE+ ++IGD+ I++N+R +L G + + + ++ S ID L+K ++K E+ E++G++ E +I FVK GS +L KL+ E+ L + +LE + + DK DL++ARGL+YYTG ++E G +GSI +GGRY+ L+G F +++P VG+S+G+ R+ + Sbjct: 87 DTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVNIGDFVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLEKIGEAKVKLEL-EKEGINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTGTVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLIS 353 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |