CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_CLOAB (Histidyl-tRNA synthetase OS=Clostridium acetobutylicum GN=hisS PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.103e-38 Identity = 100/289 (34.60%), Postives = 163/289 (56.40%), Query Frame = 3 Query: 27 LRYDLTVPFARYVA--MNGLT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNF 878 LR+DLTVPF+R+ A M+ LT FKR+Q+ KVYR + KGRYREFYQCD D+ G + D ++ + ++ L ++ + Y+ ++++R +L G+LE G+ + + IDK DK + EQ E+ K + E A I +K GS ++ L++ + ++N + ++++E + + L+ D + +L + RGLDYYTG +FE + G GSI +GGRYDNL + +P VG+S+GI R+F ++ +I N E ++V +GD F Sbjct: 78 LRFDLTVPFSRFAAQYMSDLTFPFKRYQLGKVYRGERNQKGRYREFYQCDVDVVGNGNLSIKNDAFIINMASKALRKIGLDSYKFQISNRKILTGVLE--GLNITNMQEVMILIDKYDKITEEQFLSEL--NKLIGEEKAKVISKVIKISGSSDEVVENLKK---VEIKNEMLEKGIEEVEEVIKYLKLFGVEDSEYAINLKIIRGLDYYTGTVFETLLTGNESYGSICSGGRYDNLAQNYTENVLPGVGMSIGITRLFFVLREIGFIENYNSSLNEKYLIVP-IGDTF 358
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_MICLC (Histidyl-tRNA synthetase OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=hisS PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.359e-38 Identity = 103/288 (35.76%), Postives = 156/288 (54.17%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGP--DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD 872 +L +DLTVPFARYV N F+R+Q+ KV+R + P +GR REF Q D D+ G + P D +V ++ E L L IGD+ I++N+R L +G G+ E + SIDKL+K E++ + + EE G S E A + R S + ++R G + + + L +L + L + + + V DLS+ARGLDYYTG ++E + G Q+GSI +GGRYD L G + P VG+S+G+ R+ +M + ++ R+ T V V L D Sbjct: 90 ALHFDLTVPFARYVVENAGHLAFPFRRYQMQKVWRGERPQEGRAREFTQADIDVVGD-GALSPRYDADVALVMAEALGALPIGDFLIRVNNRKLAEGFYR--GIGLEDTAGVLRSIDKLEKVGPEEVARLLQEEVGASPEQAAQALALADIRTSDTSFVERVRALG---VTHELLEEGLTELADVVATLHR-RAPGRAVADLSIARGLDYYTGTVYETVLVGHEQLGSICSGGRYDALASK-GNRVFPGVGLSIGVTRL--VMRMLSQQMAVASRSVPTAVYVALTAD 367
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_STRMK (Histidyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=hisS PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.999e-38 Identity = 105/298 (35.23%), Postives = 166/298 (55.70%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNG--LT-SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPS-EKFRTICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGS----PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI--IRATETQVLVGLLGD 872 +LR+DLTVP ARYVA + LT F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + +EL IGD+ I+LN+R L+ G E GV E+ + +DKLDK+ + +++ +V E + E ++I FV R L L+ L + + L ++ L QAL E + C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + +E I I + Q LV L+ + Sbjct: 87 ALRFDLTVPLARYVAEHEHELTFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRKLMRGFFESLGVAEGERQLAVLREVDKLDKRGADYVRETLVGEGFEIPAEQVEKILAFVAVRSQGHADALAQLATLEADAGSSEILRTGVAELREVLQLVQALGVPETAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQL----REAGLIDGIEGSSVQALVALMDE 375
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH1_BACC1 (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 10987) GN=hisS1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.999e-38 Identity = 102/274 (37.23%), Postives = 156/274 (56.93%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQ 803 DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD DI G E + + E++ + EL L++ + I+ N+R LL+G+LE +P+E+ + S+DK++K + ++K+++E +G+S E AD I V LS L+ + F E + L D +L+ L Q L + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q Sbjct: 69 DQGKRNLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVG-VESVMAEAELMSMAFELFRTLNL-EVTIQYNNRKLLNGILESINIPTERTSDVILSLDKIEKIGIDGVRKDVLE-RGISEEMADTICNTV---------LSCLKLTIADFKEAFNNPLVADGVNELQQLQQYLIALGINENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH1_BACCZ (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ZK / E33L) GN=hisS1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.036e-37 Identity = 100/274 (36.50%), Postives = 156/274 (56.93%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLA---LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQ 803 DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD DI G E + + E++ + EL L++ + I+ N+R LL+G+LE +P+E+ + S+DK++K + ++K+++E +G+S E AD I V LS L+ F + + L +++L+ L Q L + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q Sbjct: 69 DQGKRELALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVG-VESVMAEAELMSMAFELFRTLNL-EVTIQYNNRKLLNGILESINIPTERTSDVILSLDKIEKIGIDGVRKDVLE-RGISEEMADTICNTV---------LSCLKLSIDDFKDAFNTPLVAEGVNELQQLQQYLIALGINENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANCP (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=hisS PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.660e-37 Identity = 95/268 (35.45%), Postives = 150/268 (55.97%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGS----PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G E GV + + + +DK+DK+ E ++ + E G++ D+I FV R + L L L + L ++ L +AL E + C++ S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 92 ALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGELQLAVLREVDKIDKRGAEYVRDTLAGEGFGIAAAQVDKILAFVAVRSNGHADALAQLQALETSVGASVTLGEGIAELREVLELVKALGVPETAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLF 354
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANC8 (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hisS PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.660e-37 Identity = 97/267 (36.33%), Postives = 151/267 (56.55%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKER--GSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCID----KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G E GV + + + +DK+DK+ E ++ + E G++ D+I FV R G L E S+ +SA L + + L + LE K + + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 92 ALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGELQLAVLREVDKIDKRGAEYVRDTLTGEGFGIATAQVDKILAFVAVRSNGHADALAQLQALEASV---GASATLG-EGIAELREVLELVKALGVPETAYCLNFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLF 354
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH1_BACCR (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hisS-1 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 102/274 (37.23%), Postives = 155/274 (56.57%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQ 803 DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD DI G E + + E++ + EL L++ + I+ N+R LL+G+LE +P+E + S+DK++K + ++K+++E +G+S E AD I V LS L+ + F E + L D +L+ L Q L + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q Sbjct: 70 DQGKRELALRYDLTIPFAKVVAMNPNLRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVG-VESVMAEAELMAMAFELFRTLNL-EITIQYNNRKLLNGILESINIPTELTSDVILSLDKIEKIGIDGVRKDVLE-RGISEEMADTICNTV---------LSCLKLTIADFKEAFNNPLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDRSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANOR (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=hisS PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 101/299 (33.78%), Postives = 162/299 (54.18%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGS----PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G E GV + + + +DK+DK+ + ++ +V E G++ E RI FV R L L L L ++ L +AL E++ C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + L Sbjct: 92 ALRFDLTVPLARYVAEHEHDLSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGELQLAVLREVDKIDKRGADYVRDTLVGEGFGIAAEQVARILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKALGVPERAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRL 383
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANOP (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hisS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 101/299 (33.78%), Postives = 162/299 (54.18%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGS----PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G E GV + + + +DK+DK+ + ++ +V E G++ E RI FV R L L L L ++ L +AL E++ C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + L Sbjct: 92 ALRFDLTVPLARYVAEHEHDLSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGELQLAVLREVDKIDKRGADYVRDTLVGEGFGIAAEQVARILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKALGVPERAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRL 383 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |