CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANOM (Histidyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hisS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 102/298 (34.23%), Postives = 164/298 (55.03%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFV--KERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCID----KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G E GV + + + +DK+DK+ + ++ +V E G++ E RI FV + G L E S+ +SA L + + L + LE K + + S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + L Sbjct: 92 ALRFDLTVPLARYVAEHEHDLSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGELQLAVLREVDKIDKRGADYVRDTLVGEGFGIAAEQVARILAFVALRSEGHADALAQLQALEASV---GASATLG-EGIAELREVLELVKALGVPERAYCLNFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSRLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRL 383
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XANC5 (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hisS PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 107/315 (33.97%), Postives = 169/315 (53.65%), Query Frame = 3 Query: 3 DQGGEL-----CSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYE-RMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGV-PSEKFRTICSSIDKLDKQSFEQIKKEMV-EEKGLSVETADRIGTFVKERG-SPLVLLSKL----RQEGSLFLENSSAKLALDDLEILFQAL------EKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDNFL 881 D GGE +LR+DLTVP ARYVA + F+R+Q+ +VYR + +GR+REFYQCD D+ G+ + D EV+ ++ + EL IGD++++LN+R LL G GV +E+ + +DKLDK+S E ++ ++ + GL+ + RI F K R S L K+ + S N DDL + + + E + C++ S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + L Sbjct: 80 DAGGENGGLPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFHAQGVVDAEQQALVLREVDKLDKRSAEDVRATLMGPDFGLAEDAVRRILDFAKIRSVSHADALDKIDWVVNEVQSRSGGNEDLHAGADDLREVLELVKALGVPESAYCLN-----FSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSKLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRL 387
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH1_BACAN (Histidyl-tRNA synthetase 1 OS=Bacillus anthracis GN=hisS-1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 101/274 (36.86%), Postives = 155/274 (56.57%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQ 803 DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD DI G E + + E++ + EL L++ + I+ N+R LL+G+L+ +P+E + S+DK++K + ++K+++E +G+S E AD I V LS L+ + F E + L D +L+ L Q L + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q Sbjct: 69 DQGKRDLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVG-VESVMAEAELMSMAFELFQTLNL-EVTIQYNNRKLLNGILQAINIPTELTSDVILSLDKIEKIGIDGVRKDVLE-RGISEEMADTICNTV---------LSCLQLSIADFKEAFNNPLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 330
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH1_BACHK (Histidyl-tRNA synthetase 1 OS=Bacillus thuringiensis subsp. konkukian GN=hisS1 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.011e-36 Identity = 101/274 (36.86%), Postives = 155/274 (56.57%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQ 803 DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD DI G E + + E++ + EL L++ + I+ N+R LL+G+L+ +P+E + S+DK++K + ++K+++E +G+S E AD I V LS L+ + F E + L D +L+ L Q L + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q Sbjct: 69 DQGKRDLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVG-VESVMAEAELMSMAFELFQTLNL-EVTIQYNNRKLLNGILQAIHIPTELTSDVILSLDKIEKIGIDGVRKDVLE-RGISEEMADTICNTV---------LSCLQLSIADFEEAFNNPLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XYLFT (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=hisS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36 Identity = 93/265 (35.09%), Postives = 146/265 (55.09%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAG-QYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGSP----LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA F+R+QI +VYR + +GR+REFYQCD D+ G Q + D EV+ ++ + +EL IGD++++LN+R +L G LE GV + + + +DKLDK+ ++ ++ + G+ + I TFV R + L L L Q+ + + + E+L + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 87 ALRFDLTVPLARYVAEYEHVLAFPFRRYQIQRVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNRKVLRGFLESQGVRDGELQLAVLREVDKLDKRGVLDVRDTLIGQGFGIPAAQVENILTFVATRSTSHADALARLDALIQDSGPEAHDMLRQGVAELREVLTLVNVLGVPEHAYRLNFSIARGLDYYTGTVYETALINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLF 351
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XYLF2 (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain M23) GN=hisS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36 Identity = 93/265 (35.09%), Postives = 146/265 (55.09%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAG-QYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGSP----LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA F+R+QI +VYR + +GR+REFYQCD D+ G Q + D EV+ ++ + +EL IGD++++LN+R +L G LE GV + + + +DKLDK+ ++ ++ + G+ + I TFV R + L L L Q+ + + + E+L + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 87 ALRFDLTVPLARYVAEYEHVLAFPFRRYQIQRVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNRKVLRGFLESQGVRDGELQLAVLREVDKLDKRGVLDVRDTLIGQGFGIPAAQVENILTFVATRSTSHADALARLDALIQDSGPEAHDMLRQGVAELREVLTLVNVLGVPEHAYRLNFSIARGLDYYTGTVYETALINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLF 351
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XYLFM (Histidyl-tRNA synthetase OS=Xylella fastidiosa (strain M12) GN=hisS PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36 Identity = 92/265 (34.72%), Postives = 146/265 (55.09%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAG-QYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGSP----LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA F+R+QI +VYR + +GR+REFYQCD D+ G Q + D EV+ ++ + +EL IGD++++LN+R +L G LE GV + + + +DKLDK+ ++ ++ + G+ + I TFV R + L L L ++ + + + E+L + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 87 ALRFDLTVPLARYVAEYEHVLAFPFRRYQIQRVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNRKVLRGFLESQGVRDGELQLAVLREVDKLDKRGVLDVRDTLIGQGFGIPAAQVENILTFVATRSTSHADALARLDALIEDSGPGSHDMLRQGVAELREVLTLVNVLGVPEHAYRLNFSIARGLDYYTGTVYETSLINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLF 351
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_XYLFA (Histidyl-tRNA synthetase OS=Xylella fastidiosa GN=hisS PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.117e-35 Identity = 92/265 (34.72%), Postives = 145/265 (54.72%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAG-QYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERGSP----LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVF 788 +LR+DLTVP ARYVA F+R+Q+ +VYR + +GR+REFYQCD D+ G Q + D EV+ ++ + +EL IGD++++LN+R +L G LE GV + + +DKLDK+ ++ ++ + G+ + I TFV R + LV L L ++ + + E+L + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F Sbjct: 87 ALRFDLTVPLARYVAEYEHVLAFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNRKVLRGFLESQGVRDGDLQLAVLREVDKLDKRGVLDVRDTLIGQGFGIPAAQVENILTFVATRSTSHADALVRLDALIEDSGPEAHEMLRQGVAELREVLTLVNVLGVPEHAYRLNFSIARGLDYYTGTVYETSLINHPQIGSICSGGRYENLANHYTQSKLPGVGISIGLTRLF 351
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_SILPO (Histidyl-tRNA synthetase OS=Silicibacter pomeroyi GN=hisS PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35 Identity = 107/313 (34.19%), Postives = 169/313 (53.99%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAM--NGL-TSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEKGLSVETA--DRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLA--------LDDLEILFQALEKSKC-IDKVVFDLSLARGLDYYTGVIFEA-----IF--KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLL 866 D G+ +LRYDLT P AR A N L T ++R+ + V+R + P GRYR+FYQCD D G M D E+ +L++ L + I GDY +++N+R +L+G+LE G+ E R + +IDK DK + ++ E++ + L A D +G + G L L+ + + + N A + +D+LE + L D++V D S+ RGL YYTG ++EA IF KG Q GS++ GGRYD+L+ F ++VPA GVS+G++R+ + +E+ +I A V+V ++ Sbjct: 82 DGAGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRNEKPGPGRYRQFYQCDADTVGSAS-MAADAEICAMLSDTLETVGIPRGDYVVRVNNRKVLNGVLETMGLADEGQRDAVLRTIDKFDKVGEDGVR-ELLGKGRLDASGAFIDGVGLSDDQAGPVLAFLTSRGADAATTVANLRAAVGASQIGVQGIDELEQIGDLLAAGGYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAAL----REKGRIRTAERGPVVVTVM 388
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BORBZ (Histidyl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=hisS PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.243e-35 Identity = 101/278 (36.33%), Postives = 155/278 (55.76%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYE-------IKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGT--KQVPAVGVSLGIERVFTIME 800 D GG S+R+DLTVPFAR+VA N F+R Q KV+R +N KGRYREF Q DFDI G+ G D E++ ++ L E+ + E I +H +L+ E G+ EK I +IDK+DK +++K+ ++ E + E D I + V +G+ K++ S+ +N S K +E +FQ L K D +L ++RGLDYYTG++FE+ G + +GS+ +GGRYDNL+ F +++ VG S G++R+ I++ Sbjct: 67 DNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYREFMQFDFDIVGEDTFRG-DAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEKLGL-KEKSIFILRNIDKIDKIGIDKVKEALLLE--IEKEAVDSILSLVSLQGT---FKDKIQALKSILGDNESIK----RVEDVFQHLSLLKIQDSFNLNLKISRGLDYYTGIVFESEVFG-SNMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIKDIID 332 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |