CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BORBU (Histidyl-tRNA synthetase OS=Borrelia burgdorferi GN=hisS PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.243e-35 Identity = 101/278 (36.33%), Postives = 155/278 (55.76%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYE-------IKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGT--KQVPAVGVSLGIERVFTIME 800 D GG S+R+DLTVPFAR+VA N F+R Q KV+R +N KGRYREF Q DFDI G+ G D E++ ++ L E+ + E I +H +L+ E G+ EK I +IDK+DK +++K+ ++ E + E D I + V +G+ K++ S+ +N S K +E +FQ L K D +L ++RGLDYYTG++FE+ G + +GS+ +GGRYDNL+ F +++ VG S G++R+ I++ Sbjct: 68 DNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYREFMQFDFDIVGEDTFRG-DAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEKLGL-KEKSIFILRNIDKIDKIGIDKVKEALLLE--IEKEAVDSILSLVSLQGT---FKDKIQALKSILGDNESIK----RVEDVFQHLSLLKIQDSFNLNLKISRGLDYYTGIVFESEVFG-SNMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIKDIID 333
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BORAP (Histidyl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=hisS PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.243e-35 Identity = 99/279 (35.48%), Postives = 156/279 (55.91%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYE-------IKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA-IFKGATQVGSIAAGGRYDNLIGMFGT--KQVPAVGVSLGIERVFTIME 800 D GG S+R+DLTVPFAR++A N F+R Q KV+R +N KGRYREF Q DFDI G+ G D E++ ++ L E+ + E I +H +L+ E G+ EK I +IDK+DK +++K+ ++ + + E D I V +G+ K++ S+ +N S K +E +FQ L K D +L ++RGLDYYTG++FE+ +F + +GS+ +GGRYDNL+ F + +++ VG S G++R+ I++ Sbjct: 67 DNGGRDVSMRFDLTVPFARFIATNASNLKFPFRRSQFGKVFRGENSQKGRYREFMQFDFDIVGEDSFRG-DAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEKLGI-KEKSLFILRNIDKIDKIGVDKVKEALLLK--IEKEVVDSILNLVNLQGT---FKEKIQALKSILGDNESVK----RVEDVFQHLSLLKIQDSFNLNLKISRGLDYYTGIVFESEVFD--SNMGSVCSGGRYDNLVSSFSSSIQKISGVGGSFGVDRIKDIID 332
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PYRKO (Histidyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=hisS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.132e-34 Identity = 93/269 (34.57%), Postives = 141/269 (52.42%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVA---MNGLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 800 D+GG SLR D+T AR N K + IA ++R + P GRYREF+Q ++ G +R+ D EV+ + T+ + + D+ + + R+LLD ++ GV + + IDK DK S E+ + E GL+ + +++ + ++ +G P +L K + + AK + L L L+ V DL +ARG DYYT V+FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E Sbjct: 68 DKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELIGS-DRVEADAEVIALFTQSYLAVGLEDFTVNIGDRILLDEFAKMLGVEDDI--GLMRLIDKKDKMSREEFVGAL-REFGLNDDGVEKVLSLIEIKGLPDEVLPKAEE----LFTSEEAKAEIKRLYELVDLLDAYGVSKWVRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILE 328
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH2_BACSK (Histidyl-tRNA synthetase 2 OS=Bacillus clausii (strain KSM-K16) GN=hisS2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.974e-33 Identity = 94/272 (34.56%), Postives = 155/272 (56.99%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSK-GRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERG-SPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLI-GMFGTKQ-VPAVGVSLGIERVFTIME 800 D+G +LRYDLT+PFA+ +AMN FKR++I KV+R D P K GR+REF QCD D+AG + + E++++ TE+ + + + I+ N+R LL GML+ICGV ++ + +DK +K +Q+ E+ +E G+ + +I ++K+ S +V + R + E + +L+ L +AL + F+ LARGL+ YTG ++E S+ +GGRYD I G+ G +Q +P VG+S GI+ ++T ++ Sbjct: 72 DRGKRALALRYDLTIPFAKVMAMNPDIRKPFKRYEIGKVFR-DGPIKAGRFREFTQCDVDVAGVDSPLA-EAELLEMATEVFRRIGL-NMTIQYNNRKLLTGMLDICGVSKDQHSAVILILDKREKIGDKQVVNEL-KEMGVDGKAISKIAQWLKQMSQSGIVDFATDRPTTPIMAE------GIAELQELEEALRYLNIDSQCTFNPFLARGLEIYTGTVYELFLTEGAIQSSVGSGGRYDQAISGLTGEEQPMPTVGISFGIDVIYTALK 333
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_LEIXX (Histidyl-tRNA synthetase OS=Leifsonia xyli subsp. xyli GN=hisS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33 Identity = 96/268 (35.82%), Postives = 139/268 (51.87%), Query Frame = 3 Query: 27 LRYDLTVPFARYVAMNGLTS---FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIG-------TFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 800 LR+DLTVP AR+ A + F+ QIA V+R + P KGRYR+F QCD DI G+ ++ + E++ L+ L + D I++N R +L+ +L+ CG ++ SIDKLDK E + E+ E + + A +G + + G L + LR L A+ +LE L AL ++ FD L RG+ YYTGVIFE G+ S+ GGRYD +IG F +VPA G S+G ERV ++E Sbjct: 94 LRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERPQKGRYRQFVQCDIDIVGEASQLA-EAELITATAATLDALGLKDCTIRVNDRRILNALLQHCGFAEARWPRALISIDKLDKIGAEGVVAELSEG---AADAAAALGGVLAGFEPHLADGGVELTAQAILR-----ILPAGVDTAAIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSG--SSVGGGGRYDGMIGRFLGTEVPACGFSIGFERVVDLIE 350
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BORGA (Histidyl-tRNA synthetase OS=Borrelia garinii GN=hisS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33 Identity = 99/301 (32.89%), Postives = 163/301 (54.15%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYE-------IKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGT--KQVPAVGVSLGIERVFTI--MEQIQKERNQIIRATETQVLVGL 863 D GG S+R+DLT+PFAR+VA N F+R Q KV+R +N KGRYREF Q DFDI G+ + D E++ ++ L E+ + E I +H +L+ E G+ E I +IDK+DK +++K+ ++ + + E D I + V +G+ K++ S+ +N S K +E +++ L K D +L ++ GLDYYTG++FE+ G + +GS+ +GGRYDNL+ + + ++V VG S G++R+ I +EQ + + +A ++V L Sbjct: 67 DHGGRDVSMRFDLTIPFARFVATNISDLKFPFRRSQFGKVFRGENSQKGRYREFMQFDFDIVGE-DGFRADAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEKLGIKEESI-FILRNIDKIDKIGIDKVKEALLLK--IEKEAVDSILSLVNLQGA---FKDKIQALKSILGDNESVK----RVEDVYRHLSLLKIQDSFNLNLKISGGLDYYTGIVFESEVFG-SNMGSVCSGGRYDNLVSSYSSSIQKVSGVGGSFGVDRIKDIIDLEQFSYIKIFVTKARSKVLIVNL 355
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_RHOSK (Histidyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hisS PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32 Identity = 100/299 (33.44%), Postives = 163/299 (54.52%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGV--PSE--KFRT----ICSSIDKLDKQSFEQIKK-----------EMVEEKGLSVETADRI-GTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALE-KSKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 797 D+ G+ +LRYDLT P AR A N L S ++R+ + V+R + P GR+R+FYQCD D G + D E+ +L++ L + I GDY +++N+R +L+G++E+ GV PS+ KF + +IDK+D+ ++ + + GLS E A+ + G +R + ++LR+ L ++ + +LE + + L+ + D++V D S+ RGL YYTG +FEA KG Q GS+A GGRYD+L+ F + VPA GVS+G++R+ + Sbjct: 78 DEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGSAS-VAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNGVMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGKTGVRALLGAGRKDESGDFTKGAGLSDEQAEVVMGFMAAKRDTGAATAARLRE---LVGASTLGCEGVQELETIAELLDAQGYGPDRIVVDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATGVSIGVDRLLAAL 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_SILST (Histidyl-tRNA synthetase OS=Silicibacter sp. (strain TM1040) GN=hisS PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32 Identity = 102/303 (33.66%), Postives = 159/303 (52.48%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE--KFRTICSSIDKLDKQSFEQIKKEM-----------VEEKGLSVETADRIGTFVKERGSPLVLL----------SKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA-----IF--KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQ 803 D G+ +LRYDLT P AR A N L S ++R+ + V+R + P GR+R+FYQCD D G M D E+ +L++ L ++ I GDY +++N+R +L+G+LE G+ + K + +IDK DK +++ + ++ GL A+ + F+ +G + SK+ QEG LE + LF A + D+++ D S+ RGL YYTG +FEA IF KG Q GS+A GGRYD L+ F ++VPAVG+S+G++R+ + + Sbjct: 82 DGKGDWMALRYDLTAPLARVYAQHRNDLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGTAS-MAADAEICMMLSDTLEKVGIPRGDYLVRVNNRKVLNGVLEAMGLLEDDPKRDDVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLEDHQAEPVLAFLTSKGDTVTETMTNLRAAVGDSKVGQEGIAELELMGS---------LFAAAGYGE--DRILIDPSIVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDGLVKRFTGQEVPAVGLSIGVDRLLAALRE 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_RHOS4 (Histidyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hisS PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32 Identity = 100/299 (33.44%), Postives = 162/299 (54.18%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGV--PSE--KFRT----ICSSIDKLDKQSFEQIKK-----------EMVEEKGLSVETADRI-GTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALE-KSKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 797 D+ G+ +LRYDLT P AR A N L S ++R+ + V+R + P GR+R+FYQCD D G + D E+ +L++ L + I GDY +++N+R +L+G++E+ GV PS+ KF + +IDK+D+ ++ + + GLS E A+ + G R + ++LR+ L ++ + +LE + + L+ + D++V D S+ RGL YYTG +FEA KG Q GS+A GGRYD+L+ F + VPA GVS+G++R+ + Sbjct: 78 DEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGSAS-VAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNGVMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGETGVRALLGSGRKDESGDFTKGAGLSDEQAEVVMGFMAARRDTGAATAARLRE---LVGASTLGCEGVQELETIAELLDVQGYGPDRIVVDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATGVSIGVDRLLAAL 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PYRIL (Histidyl-tRNA synthetase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=hisS PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32 Identity = 93/267 (34.83%), Postives = 150/267 (56.18%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTSFKR----HQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERG--SPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERV 785 D+ G LR+D+TVP AR ++ N S R + KV+R D P GRYREFYQ ++ G D EV+++ T+ L+ + Y +K+N R ++D +LE GV + + I ++DK K S E++ K M E G+S++TA+RI +E + +++KL F L + LE + +DK FD+S+ RGLDYYTG++FEA F G ++ ++ GGRYD+L+ ++ ++PA+G ++G+ER+ Sbjct: 73 DKAGRDLGLRFDMTVPIARVISYN--LSLPRPIRWYYFTKVFRYDEPQHGRYREFYQFGIELIGSASPRA-DAEVLQVFTQALDAVGARSYIVKINDRRVVDKLLERLGVSAYR-DVIYRALDKKLKLSREEVIKLMAEG-GVSLDTAERIYDIAEEMSIEEAVNVITKLDSGLGSFYNK------------LLKYLEAAVSLDKFRFDMSIVRGLDYYTGMVFEA-FAGEYKL-AVGGGGRYDDLLELYSGVKMPALGFAIGVERL 320 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |