CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PYRFU (Histidyl-tRNA synthetase OS=Pyrococcus furiosus GN=hisS PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32 Identity = 91/270 (33.70%), Postives = 137/270 (50.74%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFAR-YVAM--NGLTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSE-KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 800 D+GG SLR D+T AR YV M K + IA ++R + P GRYREF+Q ++ G +++ D EV+ + E + ++ + + R+LLD ++ GV + I DKL ++ F KE GL +++ + +G P +L + + AK ++ L L LE + D + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELIGS-DKVEADAEVIALFVESYLATGLREFTVNIGDRILLDEFAKMLGVKDDIGLMRIIDKKDKLPQEDFINALKEF----GLDKNGIEKVLELINIKGKPDEVLPLAEE----LFTSEVAKNEINRLYALIDLLEAYEVKDWIRIDLGIARGFDYYTSIVFEAIAPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILE 326
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PYRHO (Histidyl-tRNA synthetase OS=Pyrococcus horikoshii GN=hisS PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32 Identity = 93/269 (34.57%), Postives = 140/269 (52.04%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFAR-YVAMNGLTS--FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 800 D+GG SLR D+T AR YV + K + IA ++R + P GRYREF+Q ++ G +++ D EV+ + E + D+ + + R+LLD + GV + + IDK DK S E+ +++E GL +++ V+ +G P +L + ++ AK + L L LE D + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELIGS-DKVEADAEVIALFVESYLSTGLRDFTVNIGDRILLDEFAGMLGVSDDI--GLMRIIDKRDKLSQEEFIN-LLKEFGLGESEIEKVLELVEIKGRPDNVLPLAEE----LFKSKKAKEEISKLYKLTDLLEWYGVKDWIRIDLGIARGFDYYTSIVFEAISPNELGIGSIGGGGRYDNLIEIFGGKPTPATGFAIGIERLLPILE 326
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PYRAB (Histidyl-tRNA synthetase OS=Pyrococcus abyssi GN=hisS PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.181e-31 Identity = 88/269 (32.71%), Postives = 139/269 (51.67%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLTS---FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 800 D+GG +LR D+T AR + T+ K + IA ++R + P GRYREF+Q ++ G +++ D EV+ + + + D+ + + R+LLD ++ GV + + IDK DK S E+ K + E GL +++ ++ +G P +L + + AK + L L L + + + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E Sbjct: 66 DKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELIGS-DKIEADAEVIALFVDSYLSTGLKDFTVNIGDRVLLDEFAKMLGVKDDI--GLMRIIDKKDKLSQEEFLKAL-GEFGLDENGIEKVLNLIEIKGKPDDVLPLAEE----LFTSERAKEEISRLYNLVDILSWYEVDEWIQIDLGIARGFDYYTSIVFEAIVPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILE 326
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PROAC (Histidyl-tRNA synthetase OS=Propionibacterium acnes GN=hisS PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.848e-31 Identity = 88/267 (32.96%), Postives = 139/267 (52.06%), Query Frame = 3 Query: 9 GGELCSLRYDLTVPFARYVAMNG---LTSFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAG-----QYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERV 785 G + L +DLTVPFARYV N F+R+QI KV+R + P +GRYREF Q D DI G ++ + ++ L L EL + +N+R L +G G+ + +DK DK + ++K +V+E LS + A + + + ++K+R+ G + N + LD L + A+ K+ ++V +L +ARGLDYYTG ++E G +GS+ +GGRY++L G P VG+SLG+ R+ Sbjct: 77 GKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRGERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRKLSEGFYRGLGIADPM--AVLQRVDKYDKIGPDAVRKLLVDELNLSDDAAAKCVALASIQSTDDSFIAKVRELG---VANDMLEEGLDSLNRVVAAVNKA-VPGRMVANLKIARGLDYYTGTVYETELTGHESMGSVCSGGRYESL-ASDGKHVYPGVGISLGLTRL 336
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_PARDP (Histidyl-tRNA synthetase OS=Paracoccus denitrificans (strain Pd 1222) GN=hisS PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.848e-31 Identity = 96/288 (33.33%), Postives = 148/288 (51.39%), Query Frame = 3 Query: 12 GELCSLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSEK-FRTICSSIDKLDKQSFEQIKKEM-----------VEEKGLSVETADRIGTFVKERGSPLV-LLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 797 G+ +LRYDLT P AR A L S ++R+ + V+R + P GR+R+FYQCD D G + D E+ +L L I GDY I++N+R +L+G+LE GV K + +IDK DK + +++ + +E GLS E A+ + F+ +G+ L+ LR + L + + A+ + ++ + D S+ RGL YYTG +FEA KG Q GS+A GGRYD L+ F ++VPA GVS+G++R+ + Sbjct: 88 GDWLALRYDLTAPLARVAAQFRGDLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGSAS-VAADAEICAMLAAALEHAGIRRGDYLIRINNRKVLNGILESMGVAEGKPADDVLRTIDKFDKVGEQGVRQLLTTGRKDESGAFIEGVGLSPEQAEPVLAFLTSKGADNAGTLANLRAAVGASATGAEGVEELAQIARMLAAMGVGE--ERAIVDPSIVRGLGYYTGPVFEAELTFEILDDKGRKRQFGSVAGGGRYDGLVERFTGQKVPATGVSIGVDRLLAAL 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_ROSDO (Histidyl-tRNA synthetase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=hisS PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31 Identity = 100/313 (31.95%), Postives = 161/313 (51.44%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICG----------------------VPSEKFRTICSSIDKLDKQSFEQIKKEM----VEEKG-------LSVETADRIGTFVKERGSP-LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEK-SKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGATQ-VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 797 D+ G+ +LRYDLT P AR A N L ++R+ + V+R + P GR+R+FYQCD D G + D E+ +L + L + I GDY +++N+R +L+G+LE+ G + + K + +IDKLD+ E ++ + +E G LS D + +F++ +G L LR+ + + K +D+LE + + L S D++V D S+ RGL YYTG ++EA KG T+ GS+A GGRYD+L+ F ++VPA GVS+G++R+ + Sbjct: 83 DKPGDWLALRYDLTAPLARVYAQHQNDLPKPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGA-SSVAADAEICAMLCDCLEAVGIERGDYVVRINNRKVLNGVLEVIGALGDEPRLSQHFQEMAENLGKKMTAAKVGIVLRTIDKLDRLGKEGVRSLLGPGRKDESGDLTFGADLSKAQIDVVMSFLEAKGGTNSETLINLRE---IVGRSRIGKEGVDELEKISELLSAGSYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIQDDKGRTRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAAL 391
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_JANSC (Histidyl-tRNA synthetase OS=Jannaschia sp. (strain CCS1) GN=hisS PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.082e-30 Identity = 94/309 (30.42%), Postives = 158/309 (51.13%), Query Frame = 3 Query: 12 GELCSLRYDLTVPFARYVAM----------NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSEKFRT----ICSSIDKLDKQSFEQIKK-----------EMVEEKGLSVETADRIGTFVKER-GSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALE-KSKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQ 824 G+ +LRYD+T P AR A + L S ++R+ + V+R + P GR+R+FYQCD D G + D E+ +L + L + I GDY +++N+R +L+G++E+ G+ + + +IDK+D+ ++ + + G+S AD+I FV+ G +S L+ SL + + +LE + L + D+++ D S+ RGL YYTG ++EA KG T Q GS+A GGRYD+L+ F ++VPA GVS+G++R+ + K + + Sbjct: 85 GKWLALRYDMTAPLARVAAQFRERPLPGQEDSLPSPYRRYTMGPVWRNEKPGPGRFRQFYQCDADTVGA-PSVAADAEICAMLADCLEAVGIERGDYVVRVNNRKVLNGVMEVAGLAGDDKEAARGIVLRAIDKMDRLGAGGVRDLLGDGRKDESGDFTKGAGISSANADKILAFVQATAGDNAATVSNLK---SLTEGSDIGTQGVSELEQIASLLAAQGYGPDRIIIDPSVVRGLGYYTGPVYEAELTFDVQNEKGQTVQFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALHATGKLKGE 389
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_TREPS (Histidyl-tRNA synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=hisS PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30 Identity = 88/278 (31.65%), Postives = 134/278 (48.20%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI 827 D+GG +LR+DLTVP AR+VA + FKR+ AKV+R + P GRYREF QCDFDI G + + DFE++K + +L I + HR L D L + S++ I IDK K + + ++ E +I T+V V S ++ L +++ L VFD S+ RG DYYTG++ E +GS+ +GGRYD+L ++ V VG S+G++R++ +Q+ R + Sbjct: 73 DKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREFTQCDFDIVGS-DSVCADFEILKSIRHMLYMAGAEHIRIHVAHRGLFDRFLRALSL-SDQAEHILRIIDKRAKMAPHVLTAQL--ESLCDPVRVQKIMTYVSAGEVDGVAPSFEHTLSAIETLTGGVSEESTRLRKIYELLCAVNIQSSYVFDPSITRGFDYYTGMVCETFLTQLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLGMSREHV 346
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_TREPA (Histidyl-tRNA synthetase OS=Treponema pallidum GN=hisS PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30 Identity = 88/278 (31.65%), Postives = 134/278 (48.20%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI 827 D+GG +LR+DLTVP AR+VA + FKR+ AKV+R + P GRYREF QCDFDI G + + DFE++K + +L I + HR L D L + S++ I IDK K + + ++ E +I T+V V S ++ L +++ L VFD S+ RG DYYTG++ E +GS+ +GGRYD+L ++ V VG S+G++R++ +Q+ R + Sbjct: 73 DKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREFTQCDFDIVGS-DSVCADFEILKSIRHMLYMAGAEHIRIHVAHRGLFDRFLRALSL-SDQAEHILRIIDKRAKMAPHVLTAQL--ESLCDPVRVQKIMTYVSAGEVDGVAPSFEHTLSAIETLTGGVSEESTRLRKIYELLCAVNIQSSYVFDPSITRGFDYYTGMVCETFLTQLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLGMSREHV 346
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BARBK (Histidyl-tRNA synthetase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=hisS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.411e-30 Identity = 99/298 (33.22%), Postives = 149/298 (50.00%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDIG--DYEIKLNHRLLLDGMLEICGVP----SEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETAD---RIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLA--------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGATQV-GSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D+ + SLRYDLT P ARY A N ++ ++ V+R + P GR+R+F Q D DI G + D E+ + + L L I DY I+L++R +LDG+LE+ G+ +EK TI +IDK DK E ++ ++ KG E+ D G +E L L+S + L+N + + +LE + K+ D++ D S+ RGLDYYTG +FEA +G V GS+ GGRYD L+ F + VPA G S+G+ R+ + + K Sbjct: 76 DEDEQWMSLRYDLTAPLARYFAENFEILPKPYRSYRSGFVFRNEKPGPGRFRQFMQLDADIVGS-STVAADAEICMMAADSLERLGIQRHDYVIRLSNRKILDGVLELIGLQGDEQAEKRLTILRAIDKFDKFGMEGVR--LLLGKGRLDESGDFTKGAGLSQQESEPILSLISVGAETAEATLDNLKNIVGHTIRGLEGIHELEEMQTIFSKNGYQDRIKIDPSVVRGLDYYTGPVFEAELLFDVLNEEGQKVVFGSVGGGGRYDGLVARFRDEAVPATGFSVGVSRLMAALHNLGK 370 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |