CV884404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_DINSH (Histidyl-tRNA synthetase OS=Dinoroseobacter shibae (strain DFL 12) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 100/293 (34.13%), Postives = 152/293 (51.88%), Query Frame = 3 Query: 24 SLRYDLTVPFARYVAM--NGLTS-FKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSEKFRT--------ICSSIDKLDKQSFEQIK----KEMVEEKGLSVETA-------DRI-GTFVKERGSPLVLLSKLRQEGSLFLENSSAKL-ALDDLEILFQALEKSKC-IDKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 797 +LRYDLT P AR A N L S ++R+ + V+R + P GR+R+FYQCD D G + D EV +L L + I GDY +++N+R +L+G+ E G+ ++ ++DK D+ + +K K +E G VE A DRI G ++ + L L +L + + NS L +++L+ + L D++V D S+ RGL YYTG +FEA KG T Q GS+A GGRYD+L+ F + VPA GVS+G++R+ + Sbjct: 85 ALRYDLTAPLARVAAQYRNDLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGA-PSVAADAEVCAMLATALEAVGIARGDYIVRVNNRKVLNGVFESAGLLDSEYLADNLKRVGIAIRAVDKFDRLGSDGVKALLGKGREDESGAFVEGANLAEWQIDRILGFATAKQSTELETLDRLTE----LVGNSDEGLQGVEELKHISDLLSAQGFGPDRIVIDPSVVRGLGYYTGPVFEAELTFEVQNDKGQTVQFGSVAGGGRYDDLVKRFTGQAVPATGVSIGVDRLLAAL 372
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUSU (Histidyl-tRNA synthetase OS=Brucella suis GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAEGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUSI (Histidyl-tRNA synthetase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUO2 (Histidyl-tRNA synthetase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADALERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUME (Histidyl-tRNA synthetase OS=Brucella melitensis GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUMB (Histidyl-tRNA synthetase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUC2 (Histidyl-tRNA synthetase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAEGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUAB (Histidyl-tRNA synthetase OS=Brucella abortus GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUA2 (Histidyl-tRNA synthetase OS=Brucella abortus (strain 2308) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370
BLAST of CV884404 vs. ExPASy Swiss-Prot
Match: SYH_BRUA1 (Histidyl-tRNA synthetase OS=Brucella abortus (strain S19) GN=hisS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 3 Query: 3 DQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIAGQYERMGPDFEVVKILTELLNELDI--GDYEIKLNHRLLLDGMLEICGVPSE----KFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQ-------EGSLFLENSSAKLA-----------LDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEA--IFKGATQ------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 812 D + SLRYDLT P ARYVA N T ++ ++ V+R + P GR+R+F Q D D G + D E+ ++ + L L I GDY I++N+R +LDG+L+ G+ E K + +IDKLDK E ++ ++ KG D G F K P + K+ +G+ + N A +A L D++ LF A +V D S+ RGL+YYTG +FEA +F + GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K Sbjct: 76 DDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGA-PNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVR--LLLGKG----RLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFA---GGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLMTALKNLGK 370 The following BLAST results are available for this feature:
BLAST of CV884404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884404 ID=CV884404; Name=CV884404; organism=Citrus sinensis; type=EST; length=889bpback to top |