CV884403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884403 vs. ExPASy Swiss-Prot
Match: YHH5_SCHPO (Uncharacterized oxidoreductase C28F2.05 OS=Schizosaccharomyces pombe GN=SPBC28F2.05c PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14 Identity = 60/241 (24.90%), Postives = 112/241 (46.47%), Query Frame = 1 Query: 139 VLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIH---WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLE 852 V+E++ LG R D+A Y E+ +AI + + RE++ + TK+ S + A+++SL+ +D+ LIH WP+ S W A+ + Q+ G IGVSN++ +E I++ P +NQVE + + + +C + I+V AFSPL +++ L ++ + KT A + LR+ +++G + K+ + + EN++ Sbjct: 30 VIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSPKWPVRRIES--------------------WRALLQHQKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSPL-------TRGYRLSDIRLLDLSLKYNKTPANILLRYCLQKGVSPIFKASSFVHIHENVK 243
BLAST of CV884403 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.500e-13 Identity = 76/282 (26.95%), Postives = 117/282 (41.49%), Query Frame = 1 Query: 124 AMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF------ITTKLWCSDAH--RDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVW------EAMEECQRHGLTKSIGVSNFSPKKIETI---LAFATIPPTVNQVEMN---PAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG----------------TNQVMNN-----EALKQIAAVHGKTVAQVCLRWIIEQGATAAVK-SFNKERLKE 843 A K A S+ G FDTA +YG++ +LG +E L + R+E + + TK R+ VV ALK SL L++ VDLY +HWP G+W + + + GL K++GVSN+S K++ L IP NQV + A +Q + C + + A+SP+ A G+ G T + + +KQI + KT Q+ L W++ QG + + N E+ KE Sbjct: 86 AAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALPWRFGRESVVTALKDSLSRLELSSVDLYQLHWP------------------------GLWGNEGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPI-AQGALTGKYTPENPPSGPRGRIYTREFLTKLQPLLNRIKQIGENYSKTPTQIALNWLVAQGNVIPIPGAKNAEQAKE 342
BLAST of CV884403 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11 Identity = 72/280 (25.71%), Postives = 117/280 (41.79%), Query Frame = 1 Query: 94 GSAVDNIDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKL---WCSD-----AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA---TIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPL--GAVGSSWGTNQVMNNEALKQ-------------IAAV----------HGKTVAQVCLRWIIEQ-GATAAV 813 G+ DE + ++ G DTA YG +E +G+AI E K R+++ + TK W ++ A+R +V ++ SLK LQ +Y+DLY +HWP P E+ E M+E G ++IGVSNFS ++++T A A TI P N E + ++ + K I + L G + + L+ ++AV +GK+V + +RWI++Q GA A+ Sbjct: 25 GTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGK------RDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETA-----------------EVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFERE---MEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIAL 278 The following BLAST results are available for this feature:
BLAST of CV884403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884403 ID=CV884403; Name=CV884403; organism=Citrus sinensis; type=EST; length=862bpback to top |