CV884402

Overview
NameCV884402
Unique NameCV884402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = -3
Query:  458 YVDLYFIHWPMSAKPSEKLRNDIPEED-----LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW 796
            Y+DLY +HWP + +  +   N  P+ D       S  Y   W+A+E     GL K++G+SNF+ ++I+ IL+ A++ P V QVE +P   Q +L+  C+++ + VTA+SPLG+   +W
Sbjct:   91 YLDLYLMHWPYAFERGD---NPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVKALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW 205          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFS-PKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            YVDL  IHWP                D VS++     +A+ E ++ GLT+ IG+SNF+ P   + I A        NQ+E++P  Q RK+V++ K+  I +T++  L          + + +E + +IAA H  T AQV L W + +G +    S  +E L  +L   D  L  +D + I
Sbjct:   90 YVDLTLIHWPSPG-------------DAVSVEE--FMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTRRENLASSLLAQDLHLDAEDKNAI 247          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFS-PKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            YVDL  IHWP          +++  E+ +        +A+ E ++ GLT+ IG+SNF+ P   + I A        NQ+E++P  Q RK+V + K   I +T++  L          + + +E + +IAA H  T AQV L W + +G +    S  +E L+ NL+  +  L  +D   I
Sbjct:   90 YVDLTLIHWPSP-------NDEVSVEEFM--------QALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRENLESNLKAQNLQLDAEDKKAI 247          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 58/181 (32.04%), Postives = 87/181 (48.07%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            Y+DLY +H P+   P  + +  I E           W+AME     GL  S+GVSNF    +E +L  +TI P VNQ+E +P   +  + LVEFC+SK IIV  + PL  +       Q    E  K + + +  +  Q+ L+W   +G      +   ER+KE L    + L   D D++
Sbjct:  102 YLDLYLLHSPI---PFYEKKIPISEG----------WKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIVEGYGPLSPLVRD---AQGPVAEFTKSLESKYHVSDTQILLKWAYSKGVIPITTTSKIERMKECLNFDSFTLDKADIDEL 266          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 55/180 (30.56%), Postives = 86/180 (47.78%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFS-PKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            YVDL  IHWP                D VS++     +A+ E ++ GLT+ IG+SNF+ P   + I A        NQ+E++P  Q RK+V++ K+  I +T++  L          + + +E + +IA  H  T  QV L W + +G +    S  +E L  NL   D  L  +D + I
Sbjct:   90 YVDLTLIHWPSPG-------------DAVSVEE--FMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTL-------AYGKALKDEVIARIAVKHNATPVQVILAWAMGEGYSVIPSSTRRENLASNLLAQDLHLDAEDKNAI 247          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFS-PKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            YVDL  IHWP          +++  E+ +        +A+ E ++ GLT+ IG+SNF+ P   + I A        NQ+E++P  Q RK+V + K   I +T++  L          + + +E + +IAA H  T AQV L W + +G +    S  ++ L+ NL+  +  L  +D   I
Sbjct:   90 YVDLTLIHWPSP-------NDEVSVEEFM--------QALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLDAEDKKAI 247          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12
Identity = 55/202 (27.23%), Postives = 96/202 (47.52%), Query Frame = -3
Query:  242 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSL--------------DYNGVWEAMEECQ---RHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQR 796
            YVDL   HWP+     EK+++      LV                DY   ++ +E+          ++IGVSNFS + +E ++    + PTVNQVE +P   Q +L +FC    I++TA+SPLG+ G+       +    +K++A  +  T   + + + I QG     +S N  R+  ++E    +LT D+  ++    ++
Sbjct:  124 YVDLLLQHWPLCF---EKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHGA-----PNLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEK 315          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11
Identity = 57/200 (28.50%), Postives = 83/200 (41.50%), Query Frame = -3
Query:  209 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH---GLTKSIGVSNFSPKKI-ETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQRRMMPRDDFIIP 796
            YVDL  IHWP    P++++                V E M E  +    GLT+ IG+SNF+   + + I A        NQ+E++P  Q R +V+F K   I VT++  L          + +    +K IA  HG T AQV L W ++ G      S     L  NL      L   D   I  + +   +   D + P
Sbjct:   90 YVDLTLIHWP---SPNDEV---------------SVAEFMSELLKAKGLGLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAVTSYMTL-------AYGKALAEPVIKTIAEQHGATPAQVILSWAMQLGYGVIPSSTKAANLASNLLAQKLCLNAADMALIATLDRNERLVSPDGLAP 264          
The following BLAST results are available for this feature:
BLAST of CV884402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
AK1A1_CRIGR7.486e-1736.44Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]
DKGB_SALTY4.108e-1531.112,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_ECO574.108e-1530.002,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
I3ACR_SCHPO5.365e-1532.04NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
DKGB_SALTI9.151e-1530.562,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_ECOLI1.195e-1429.442,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
ARA1_YEAST1.908e-1227.23D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
DKGB_YERPE2.755e-1128.502,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884402 ID=CV884402; Name=CV884402; organism=Citrus sinensis; type=EST; length=798bp
TTTTGCATAATAGTATTTTATTTATTCATTCCTTGATGAGAAGATAGAGA
GTAAGAGGGAGAAATAAAATGCCTTCTTTTTTTTTTTTTTTTTGCACACA
TACTTGGAGCTAATCGCAGTAGAAATCAATACAGCACGAATTTGATATTA
AAAGCGAGAGATCTATCTACTCATCCCACAAGTCTTCAGGTGTCTTGAAT
GGTCCATTAGGGATAATGAAATCATCTCTAGGCATCATTCTGCGCTGCGG
GATTTGACGGATCTTGTCATGATCGTCATCAGTTAGTGCCCAGTCAAAGA
TCTCCAAGTTCTCTTTCAGTCTCTCCTTGTTGAAGCTCTTAACAGCCGCA
GTTGCCCCCTGCTCAATTATCCATCGAAGACAAACCTGAGCCACAGTTTT
GCCATGAACGGCGGCAATCTGCTTCAGTGCTTCATTGTTCATAACTTGAT
TCGTGCCCCAGCTGGACCCGACGGCTCCCAAAGGAGAGAATGCGGTAACA
ATAATACTTTTGGACTTGCAAAATTCTACGAGCTTTCTCTGTTGCCAGGC
AGGGTTCATCTCCACCTGATTGACAGTAGGAGGGATGGTAGCGAAGGCGA
GTATGGTCTCAATCTTCTTAGGAGAGAAGTTGCTGACACCAATGGACTTA
GTGAGGCCATGCCTCTGGCACTCTTCCATGGCTTCCCACACACCGTTGTA
GTCCAGTGATACAAGATCTTCTTCGGGTATATCGTTTCGTAATTTCTCAC
TTGGCTTAGCACTCATTGGCCAATGAATGAAGTACAGGTCAACATATT
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