CV884402

Overview
NameCV884402
Unique NameCV884402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24
Identity = 56/182 (30.77%), Postives = 105/182 (57.69%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAK----PSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ---VMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            Y+DLY +HWP + +    P  K  +     D  S  Y   W A+E     GL +++G+SNF+ ++I+ +L+ A++ P V QVE +P   Q +L+  C+++++ VTA+SPLG+   +W   +   ++    +  +A  HG++ AQ+ LRW +++  +   KS    R+ EN+++FD+  + ++
Sbjct:  106 YLDLYLMHWPYAFERGDSPFPKNADGTIRYD--STHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARNLEVTAYSPLGSSDRAWRDPEEPVLLKEPVVLALAEKHGRSPAQILLRWQVQRKVSCIPKSVTPSRILENIQVFDFTFSPEE 285          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 72/200 (36.00%), Postives = 106/200 (53.00%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAK--PSEKLR---------NDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVG-------SSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDL+ IH+P++ K  P E+           ++   ED+  LD    W+A+E+    G  KSIG+SNF+   I  ++  ATI P V Q+E +P  QQ KL+E+ +   I +T +S  G           +  T  +  +E +K IA  HGK+ AQV LRW  ++      KS N ERL +NL + D+ LT DD D I ++
Sbjct:  109 YVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLD---TWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIEYVQKAGIAITGYSSFGPQSFLELESKRALNTPTLFEHETIKLIADKHGKSPAQVLLRWATQRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.838e-24
Identity = 65/194 (33.51%), Postives = 101/194 (52.06%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIP-----EEDLVSLD-----YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFAT--IPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDLY +HWP+  K       ++      E+  V +D     +   WE M+E  + G TK++GVSNFS   I+ +L      + P  NQ+E++P   Q +L+ FCK K I+V A+SP G+  +      ++  +A+  +A  HG   AQ+ + W I++G     KS N ER+  N +IF   L +DD   I  +
Sbjct:  105 YVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQIEIHPLLPQDELIAFCKEKGIVVEAYSPFGSANA-----PLLKEQAIIDMAKKHGVEPAQLIISWSIQRGYVVLAKSVNPERIVSNFKIF--TLPEDDFKTISNL 291          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.838e-24
Identity = 63/183 (34.43%), Postives = 107/183 (58.47%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEEDLV--SLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIP--PTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGS-SW---GTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            Y+DL+ +HWP+S KPS        ++  +  ++D    WEA+E  +  GL +S+GVSNF+ +++E IL    +   P  NQVE +    Q KL  +CKSK I++  +S LG+    +W       ++++  L +IAA + +T A+V +R+I+++G     KSF   R+K+NL +F++ L  +D
Sbjct:  111 YLDLFLMHWPVSLKPSGASDPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSHRDRNWVDLSLPVLLDDPILNKIAAKYNRTSAEVAMRFILQKGIVVLAKSFTPARIKQNLGVFEFELKPED 293          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.706e-24
Identity = 61/190 (32.11%), Postives = 109/190 (57.37%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEEDLV--SLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIP--PTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGS-SW---GTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DL+ +HWP+S KPS        ++  +  ++D    WEA+E  +  GL +S+GVSNF+ +++E IL    +   P  NQVE +    Q KL  +CKSK I++  +S LG+    +W       ++++  L ++AA + +T A++ +R+I+++G     KSF   R+K+NL +F++ L  +D   +  +
Sbjct:  111 YLDLFLMHWPVSLKPSGASDPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSHRDRNWVDLSLPVLLDDPILNKVAAKYNRTSAEIAMRFILQKGIVVLAKSFTPARIKQNLGVFEFELKPEDMKSLESL 300          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.322e-24
Identity = 65/198 (32.83%), Postives = 105/198 (53.03%), Query Frame = -3
Query:  239 YVDLYFIHWPMSAKPSEKLRNDI---PEE-------DLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA--TIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQRR 796
            YVDLY +HWP    P+     DI   P +       D+ + ++   WE M+E  + G TK++GVSNFS   ++ +LA     + P  NQVE++P   Q +L+ FCKSK I+V A+SPLG+  +      ++    + +IA  +      V + W +++G     KS N +R+K N +IF   L+ +D + I  I + +
Sbjct:  105 YVDLYLMHWPARLDPAYIKNEDILSVPTKKDGSRAVDITNWNFIKTWELMQELPKTGKTKAVGVSNFSINNLKDLLASQGNKLTPAANQVEIHPLLPQDELINFCKSKGIVVEAYSPLGSTDA-----PLLKEPVILEIAKKNNVQPGHVVISWHVQRGYVVLPKSVNPDRIKTNRKIF--TLSTEDFEAINNISKEK 295          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.257e-24
Identity = 65/175 (37.14%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  278 YVDLYFIHWPMSAKPSEK--LRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTD 796
            YVDLY IHWP++  P+    + +   + ++   D  GVW+ ME     GL KSIG+SNF     E IL    I P   Q+E++P   Q++LVEF KSK I V ++S LG+   S  + +V +++ +K IA  +G   +Q+ L +I  QG     KS +KE L+EN+++ + +  D
Sbjct:  104 YVDLYLIHWPVTFDPAPDGTVESCGKKYNVGKFDAVGVWKKMEALVDLGLAKSIGISNFGKANTEKILGTCRICPAAIQIELHPYLNQKELVEFMKSKGIQVISYSSLGSAPGS--SAKVRDDKTIKAIAKKYGCAPSQIILSYITAQGICVIPKSRSKEHLRENIDLKELSRED 276          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 73/200 (36.50%), Postives = 109/200 (54.50%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAK--PSEKLR---------NDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGA-------VGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDL+ IH+P++ K  P E+           ++   ED+  L+    W+A+E+  + G  +SIGVSNF    +  +L  ATI P+V QVE +P  QQ +L+EF +S+ I VTA+S  G         G +  T+ +  NE +K IAA HGK+ AQV LRW  ++G     KS    RL EN ++  + L + D   I ++
Sbjct:  103 YVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDNFDYEDVPILE---TWKALEKLVKAGKIRSIGVSNFPGALLLDLLRGATIKPSVLQVEHHPYLQQPRLIEFAQSRGIAVTAYSSFGPQSFVELNQGRALNTSPLFENETIKAIAAKHGKSPAQVLLRWSSQRGIAIIPKSNTVPRLLENKDVNSFDLDEQDFADIAKL 299          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 59/176 (33.52%), Postives = 100/176 (56.82%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAK-PSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            Y+DLY +HWP++ +  S  ++     ++ VS+     WE ME+    GL KSIG+SNF+ + +  +L++A I P  NQVE++P   Q +L +FC   +I +TA+SPL       G    ++NE +  IA  + KT+  V  +W I++  +   KS    R+ EN ++F++ + + D
Sbjct:  105 YLDLYLVHWPVAFEYTSNDIQTSGSTQEFVSI--RETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLSYARIKPAANQVELHPFLSQPELKKFCDKHNIHLTAYSPL-------GNGAFVDNEEVGAIAKKYNKTIPNVLCKWAIQKNFSVIPKSSTPSRVAENFDLFNFEIEEAD 271          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAK---------PSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLG-------AVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            Y DLY +H+P+S K         P  K   D  E +  +      W AME      L +SIG+SNFS + +  +L +A I P   Q+E +P   Q +LVE+ + + + VTA+S  G       +V ++  +  +  ++ +K IA  HG+T AQV LRW  ++G     KS N +RLK+NL++  W L +++
Sbjct:  105 YFDLYIVHFPISLKYVDPAVRYPPGWKSEKD--ELEFGNATIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLVEYAQKEGLTVTAYSSFGPLSFLELSVQNAVDSPPLFEHQLVKSIAEKHGRTPAQVLLRWATQRGIAVIPKSNNPQRLKQNLDVTGWNLEEEE 293          
The following BLAST results are available for this feature:
BLAST of CV884402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
AK1A1_BOVIN1.664e-2430.77Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
XYL1_CANTR2.173e-2436.00NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
YPR1_YEAST2.838e-2433.51Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
CRO_RANCA2.838e-2434.43Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
CRO_RANTE3.706e-2432.11Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
GCY_YEAST6.322e-2432.83Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
ALDR_ENCCU8.257e-2437.14Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]
XYL1_PICST1.078e-2336.50NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
ALRA_DICDI1.078e-2333.52Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
XYL1_ASPNG1.408e-2333.51NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884402 ID=CV884402; Name=CV884402; organism=Citrus sinensis; type=EST; length=798bp
TTTTGCATAATAGTATTTTATTTATTCATTCCTTGATGAGAAGATAGAGA
GTAAGAGGGAGAAATAAAATGCCTTCTTTTTTTTTTTTTTTTTGCACACA
TACTTGGAGCTAATCGCAGTAGAAATCAATACAGCACGAATTTGATATTA
AAAGCGAGAGATCTATCTACTCATCCCACAAGTCTTCAGGTGTCTTGAAT
GGTCCATTAGGGATAATGAAATCATCTCTAGGCATCATTCTGCGCTGCGG
GATTTGACGGATCTTGTCATGATCGTCATCAGTTAGTGCCCAGTCAAAGA
TCTCCAAGTTCTCTTTCAGTCTCTCCTTGTTGAAGCTCTTAACAGCCGCA
GTTGCCCCCTGCTCAATTATCCATCGAAGACAAACCTGAGCCACAGTTTT
GCCATGAACGGCGGCAATCTGCTTCAGTGCTTCATTGTTCATAACTTGAT
TCGTGCCCCAGCTGGACCCGACGGCTCCCAAAGGAGAGAATGCGGTAACA
ATAATACTTTTGGACTTGCAAAATTCTACGAGCTTTCTCTGTTGCCAGGC
AGGGTTCATCTCCACCTGATTGACAGTAGGAGGGATGGTAGCGAAGGCGA
GTATGGTCTCAATCTTCTTAGGAGAGAAGTTGCTGACACCAATGGACTTA
GTGAGGCCATGCCTCTGGCACTCTTCCATGGCTTCCCACACACCGTTGTA
GTCCAGTGATACAAGATCTTCTTCGGGTATATCGTTTCGTAATTTCTCAC
TTGGCTTAGCACTCATTGGCCAATGAATGAAGTACAGGTCAACATATT
back to top