CV884402

Overview
NameCV884402
Unique NameCV884402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.840e-23
Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            YVDLY IHWP                      Y   W  + + ++ G+ +SIGV NF+ + +  I+  +   P +NQ+E++P   Q +L E      I+  A+ PLG         +++++ A+  +A  HGKT AQV LRW I+ G     +S N +R+  NLE+FD+ LTDD+
Sbjct:  109 YVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGV-------GRLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDE 260          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.840e-23
Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            YVDLY IHWP                      Y   W  + + ++ G+ +SIGV NF+ + +  I+  +   P +NQ+E++P   Q +L E      I+  A+ PLG         +++++ A+  +A  HGKT AQV LRW I+ G     +S N +R+  NLE+FD+ LTDD+
Sbjct:  109 YVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGV-------GRLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDE 260          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.138e-23
Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEED-----LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ----VMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIF--DWALTDDDHDKIRQI 796
            YVDLY IH+PM+ KP ++   + P ++       ++D    WEAME+C+  GL KSIGVSNF+ +++E IL    +   P  NQVE +    Q KL++FCK+  II+ A+  LG    +   +Q    ++N   L  +A  + +T A + LR  +++G      S  +ER+KEN+++   D  + DD +  +R I
Sbjct:  110 YVDLYLIHFPMALKPGDE---NFPVDEHGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKYKPVCNQVECHLYLNQMKLLDFCKTNGIILVAYGVLGTQRYNGWVDQNSPVLLNEPVLSSMAKKYNQTPALIALRHQLQRGIVVLNTSLKEERIKENMKLSPEDMKVLDDLNRNLRYI 301          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.138e-23
Identity = 53/183 (28.96%), Postives = 105/183 (57.38%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPE--EDLVSLD---YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW---GTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            Y+DLY +HWP + +  +   N  P+  +  +  D   Y   W+A+E     GL +++G+SNFS ++I+ +L+ A++ P V QVE +P   Q +L+  C+++ + VTA+SPLG+   +W       ++    ++ +A  + ++ AQ+ LRW +++      KS    R+ +N+++FD+  + ++
Sbjct:  106 YLDLYLMHWPYAFERGD---NPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFDFTFSPEE 285          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23
Identity = 54/190 (28.42%), Postives = 106/190 (55.79%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEED-----LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ---VMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DLY +HWP + +  +   N  P+         S  Y   W+A+E     GL +++G+SNF+ ++I+ IL+ A++ P V QVE +P   Q +L+  C+++ + VTA+SPLG+   +W       ++    +  +A  +G++ AQ+ LRW +++      KS    R+ +N+++FD+  + ++  ++  +
Sbjct:  106 YLDLYLMHWPYAFERGD---NPFPKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNAL 292          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.352e-23
Identity = 54/190 (28.42%), Postives = 105/190 (55.26%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEED-----LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ---VMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DLY +HWP + +  +   N  P+         S  Y   W+A+E     GL +++G+SNF+ ++I+ IL+ A++ P V QVE +P   Q +L+  C+++ + VTA+SPLG+   +W       ++    +  +A  +G + AQ+ LRW +++      KS    R+ +N+++FD+  + ++  ++  +
Sbjct:  106 YLDLYLMHWPYAFERGD---NPFPKNADGTICYDSTHYKETWKALEALVAKGLVRALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLAVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGGSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNAL 292          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22
Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = -3
Query:  260 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKI 796
            YVDLY IHWP                      Y   W  + + +  G+ +SIGV NF  + +ETI++     P VNQ+E++P   Q  L E     +I+  A+ PL       G  +++++ A+  IA  HG+T AQV LRW I+ G     +S N ER+  NL++F + LT D+ + +
Sbjct:  109 YVDLYLIHWPGGDTSK----------------YVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPL-------GVGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETL 264          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22
Identity = 57/175 (32.57%), Postives = 89/175 (50.86%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            YVDLY IHWP                      Y   W  + + ++ G+ +SIGV NF+ + +  I+  +   P +NQ+E++P   Q +L E      I+  A+ PLG         +++++ A+  +A  H KT AQV LRW I+ G     +S N +R+  NLE+FD+ LTDD+
Sbjct:  109 YVDLYLIHWPAGDHGK----------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAYGPLGV-------GRLLDHAAVTGVAQAHDKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDE 260          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 69/207 (33.33%), Postives = 104/207 (50.24%), Query Frame = -3
Query:  245 YVDLYFIHWPMSAKP---------------SEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVG-------SSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFD-WALTDDDHDKIRQIPQ 796
            YVD+++IH+P++ KP                ++ +  I EE +  LD    W A+E+    G  KS+G+SNFS   I+ +L  A I P   Q+E +P   Q +L+++ K+  I V A+S  G V         +  T  +  ++ +K IA+ H  T  QV LRW  + G     KS  KERL +NL I D   LTDD+  +I  + Q
Sbjct:  107 YVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQVPLLD---TWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERLIKYVKNAGIQVVAYSSFGPVSFLELENKKALNTPTLFEHDTIKSIASKHKVTPQQVLLRWATQNGIAIIPKSSKKERLLDNLRINDALTLTDDELKQISGLNQ 310          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 62/186 (33.33%), Postives = 107/186 (57.53%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEED-----LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ----VMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            +VDL+ +H+P+  K  +   ND P ++     L ++D+   WEA+E+    GL KSIGVSNF+ +++E IL    +   P  NQVE +    Q KL+++CKSK I++ AF  LG        +Q    ++N+  L   A    ++ A + LR+++++G     +SF +  +KENL++F++ L+ +D
Sbjct:  110 HVDLFIMHYPVPMKAGD---NDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQVECHVYNNQSKLLDYCKSKDIVLVAFGALGTQRYKEWVDQDSPVLLNDPVLCGGAKXXXRSPALIALRYLVQRGVVPLAQSFYESEMKENLQVFEFQLSPED 292          
The following BLAST results are available for this feature:
BLAST of CV884402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
Y1984_MYCSK1.840e-2333.14Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS1.840e-2333.14Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
AK1CL_RAT3.138e-2334.87Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
AK1A1_PIG3.138e-2328.96Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_HUMAN4.098e-2328.42Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
AK1A1_PONAB5.352e-2328.42Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
Y2407_MYCS21.192e-2232.96Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
Y1918_MYCSJ1.192e-2232.57Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
XYL1_KLULA1.557e-2233.33NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
AK1CD_MESAU1.557e-2233.33Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884402 ID=CV884402; Name=CV884402; organism=Citrus sinensis; type=EST; length=798bp
TTTTGCATAATAGTATTTTATTTATTCATTCCTTGATGAGAAGATAGAGA
GTAAGAGGGAGAAATAAAATGCCTTCTTTTTTTTTTTTTTTTTGCACACA
TACTTGGAGCTAATCGCAGTAGAAATCAATACAGCACGAATTTGATATTA
AAAGCGAGAGATCTATCTACTCATCCCACAAGTCTTCAGGTGTCTTGAAT
GGTCCATTAGGGATAATGAAATCATCTCTAGGCATCATTCTGCGCTGCGG
GATTTGACGGATCTTGTCATGATCGTCATCAGTTAGTGCCCAGTCAAAGA
TCTCCAAGTTCTCTTTCAGTCTCTCCTTGTTGAAGCTCTTAACAGCCGCA
GTTGCCCCCTGCTCAATTATCCATCGAAGACAAACCTGAGCCACAGTTTT
GCCATGAACGGCGGCAATCTGCTTCAGTGCTTCATTGTTCATAACTTGAT
TCGTGCCCCAGCTGGACCCGACGGCTCCCAAAGGAGAGAATGCGGTAACA
ATAATACTTTTGGACTTGCAAAATTCTACGAGCTTTCTCTGTTGCCAGGC
AGGGTTCATCTCCACCTGATTGACAGTAGGAGGGATGGTAGCGAAGGCGA
GTATGGTCTCAATCTTCTTAGGAGAGAAGTTGCTGACACCAATGGACTTA
GTGAGGCCATGCCTCTGGCACTCTTCCATGGCTTCCCACACACCGTTGTA
GTCCAGTGATACAAGATCTTCTTCGGGTATATCGTTTCGTAATTTCTCAC
TTGGCTTAGCACTCATTGGCCAATGAATGAAGTACAGGTCAACATATT
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