CV884402

Overview
NameCV884402
Unique NameCV884402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  275 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDD 796
            YVDLY IHWP  ++ +                Y   W  + + +  GLT+SIGVSNF  + ++ I+  +   P VNQ+E++P   Q +L        I+  A+SPLG VGS      +++N A+  IA    +T AQV +RW ++ G     +S + ER+K NL++FD+ LT D
Sbjct:  105 YVDLYLIHWPAGSQGT----------------YVDSWGGLMKLKELGLTRSIGVSNFHAQHLDDIIGLSFFTPAVNQIELHPLLNQAELRAVNAEHGIVTEAYSPLG-VGS------LLSNPAVTAIADAQDRTPAQVLIRWSLQLGNVVISRSSSPERIKSNLDVFDFELTAD 255          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = -3
Query:  221 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQ-RRMMPRDD 796
            Y+DLY +HWP            +P  D     Y   W+ M E Q+ GL KSIGV NF    ++ ++    + P +NQ+E++P  QQR+L  +  +  I   ++SPL   G       V + + ++ +A  +GKT AQ+ +RW ++ G     KS    R+ EN +++D+ L  D+  +I ++ Q +R+ P  D
Sbjct:  100 YIDLYLMHWP------------VPAID----HYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKG-----VFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPD 271          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.034e-22
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = -3
Query:  221 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQ-RRMMPRDD 796
            Y+DLY +HWP            +P  D     Y   W+ M E Q+ GL KSIGV NF    ++ ++    + P +NQ+E++P  QQR+L  +  +  I   ++SPL   G       V + + ++ +A  +GKT AQ+ +RW ++ G     KS    R+ EN +++D+ L  D+  +I ++ Q +R+ P  D
Sbjct:  100 YIDLYLMHWP------------VPAID----HYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKG-----VFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPD 271          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.469e-22
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = -3
Query:  221 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQ-RRMMPRDD 796
            Y+DLY +HWP            +P  D     Y   W+ M   Q+ GL KSIGV NF    ++ ++    +PP +NQ+E++P  QQR+L  +  +  I   ++SPL   G       V + + ++++A  +GKT AQ+ +RW ++ G     KS    R+ EN  ++D+ L  D+  +I ++ Q +R+ P  D
Sbjct:  100 YLDLYLMHWP------------VPAID----HYVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGEG-----VFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAKLDQGKRLGPDPD 271          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 58/191 (30.37%), Postives = 101/191 (52.88%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGV---WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPL-GAVGSSWGTN-----QVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDLY +HWP                     D+N     W+A E+    G  ++IGV NF   +++ ++A + + P VNQ+E++P + Q+ L+   ++  I+  A+SP+ GA+    G N       + +  +  IA  HG++ AQV LRW  +    A  KS N ER+ +N+++FD+AL+D +  ++ ++
Sbjct:  103 YVDLYLLHWPTK-------------------DWNATIQSWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPLLAKNRALGIVTEAWSPIGGAINDGDGDNHGGRKHPLTDPVITTIAEAHGRSAAQVILRWHFQNDVVAIPKSVNPERIAKNIDVFDFALSDAEMAQLDEL 274          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.318e-21
Identity = 70/197 (35.53%), Postives = 99/197 (50.25%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKP---SEKLRNDIPEEDLVSLDYNGV-----WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVG-------SSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y DLY +H+P+S K     EK        D     Y  V     W AME     GL KSIGVSN S   +E ++  A I P   Q+E +P  QQ KLVE+ + K I+VT +S  G +        ++  T  +  N+ +  IAA HGKT  QV LRW+ ++G     KS     L  NL + ++ LT +D ++I ++
Sbjct:  103 YFDLYLMHFPISFKFVPFEEKYPPGFYCGDGDKFIYEDVPIIETWRAMENLVDEGLVKSIGVSNVSGGLLEDLIKAARIKPASLQIEHHPYLQQNKLVEYAQLKGIVVTGYSNFGPLSFLELGNETAKKTQPLYENKTITTIAAKHGKTPFQVLLRWVNQRGIAIIPKSTFPNTLAVNLHVDEFDLTKEDFEEIAKL 299          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.318e-21
Identity = 70/200 (35.00%), Postives = 105/200 (52.50%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAK--PSEKLR---------NDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGA-------VGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDL+ IH+P++ K  P E+           N+   ED+  L+    W+A+E+    G  KSIGVSNF    +  +L  ATI P V QVE +P  QQ KL+EF +   + +TA+S  G         G +  T  +  ++ +K IAA + KT A+V LRW  ++G     KS   ERL +N     + LT +D ++I ++
Sbjct:  107 YVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILE---TWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKL 303          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: ALDX_SPOSA (Aldehyde reductase 1 OS=Sporobolomyces salmonicolor GN=ARI PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.318e-21
Identity = 62/189 (32.80%), Postives = 103/189 (54.50%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDI---PEEDLVSLDYN----GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DLY IHWP++  P   +  ++     +  V LD        W+AM +    G  K+IGVSNF  K ++ I+    + P+VNQ+E +P   Q +L+   K+K+I +TA+SPLG   ++ G   ++ +  +K+IA  +G T AQV + W I  G +   KS    R+ EN +    +L+ +D D + ++
Sbjct:  100 YLDLYLIHWPVAFPPEGDITQNLFPKANDKEVKLDLEVSLVDTWKAMVKLLDTGKVKAIGVSNFDAKMVDAIIEATGVTPSVNQIERHPLLLQPELIAHHKAKNIHITAYSPLG--NNTVGAPLLVQHPEIKRIAEKNGCTPAQVLIAWAIVGGHSVIPKSVTPSRIGENFK--QVSLSQEDVDAVSKL 284          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DLY IHWP            +PE++L    +   ++A    +  G  +SIGVSNF P+ +  ++    I P VNQ+E++P   QR+L E      I   A+SPL       G   ++ +  +  +A  HGKT AQ  +RW ++ G     KS N +R++ N ++FD+ L++ D   I  +
Sbjct:  101 YLDLYLIHWP------------VPEKNL----FVDTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEAWSPL-------GQGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVIPKSVNPQRIESNFDVFDFELSEQDMASISSL 259          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 69/200 (34.50%), Postives = 105/200 (52.50%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAK--PSEKLR---------NDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGA-------VGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDL+ IH+P++ K  P E+           ++   ED+  L+    W+A+E+  + G  +SIGVSNF    +  +   ATI P V QVE +P  QQ KL+E+ +   I VTA+S  G         G +  T  +  ++ +K IAA H K  A+V LRW  ++G     KS   ERL +N    D+ LT +D ++I ++
Sbjct:  108 YVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFVYEDVPILE---TWKALEKLVKAGKIRSIGVSNFPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITVTAYSSFGPQSFVEMNQGRALNTPTLFEHDVIKAIAAKHNKVPAEVLLRWSAQRGIAVIPKSNLPERLVQNRSFNDFELTKEDFEEISKL 304          
The following BLAST results are available for this feature:
BLAST of CV884402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
Y2161_MYCVP2.034e-2235.06Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
DKGA_ECOLI2.034e-2231.092,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_ECO572.034e-2231.092,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_SALTI3.469e-2231.09Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
MORA_PSEPU5.917e-2230.37Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
XYL1_PACTA1.318e-2135.53NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
XYL1_CANTE1.318e-2135.00NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]
ALDX_SPOSA1.318e-2132.80Aldehyde reductase 1 OS=Sporobolomyces salmonicolo... [more]
Y1985_MYCSK1.722e-2131.87Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
XYL1_CANSH1.722e-2134.50NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884402 ID=CV884402; Name=CV884402; organism=Citrus sinensis; type=EST; length=798bp
TTTTGCATAATAGTATTTTATTTATTCATTCCTTGATGAGAAGATAGAGA
GTAAGAGGGAGAAATAAAATGCCTTCTTTTTTTTTTTTTTTTTGCACACA
TACTTGGAGCTAATCGCAGTAGAAATCAATACAGCACGAATTTGATATTA
AAAGCGAGAGATCTATCTACTCATCCCACAAGTCTTCAGGTGTCTTGAAT
GGTCCATTAGGGATAATGAAATCATCTCTAGGCATCATTCTGCGCTGCGG
GATTTGACGGATCTTGTCATGATCGTCATCAGTTAGTGCCCAGTCAAAGA
TCTCCAAGTTCTCTTTCAGTCTCTCCTTGTTGAAGCTCTTAACAGCCGCA
GTTGCCCCCTGCTCAATTATCCATCGAAGACAAACCTGAGCCACAGTTTT
GCCATGAACGGCGGCAATCTGCTTCAGTGCTTCATTGTTCATAACTTGAT
TCGTGCCCCAGCTGGACCCGACGGCTCCCAAAGGAGAGAATGCGGTAACA
ATAATACTTTTGGACTTGCAAAATTCTACGAGCTTTCTCTGTTGCCAGGC
AGGGTTCATCTCCACCTGATTGACAGTAGGAGGGATGGTAGCGAAGGCGA
GTATGGTCTCAATCTTCTTAGGAGAGAAGTTGCTGACACCAATGGACTTA
GTGAGGCCATGCCTCTGGCACTCTTCCATGGCTTCCCACACACCGTTGTA
GTCCAGTGATACAAGATCTTCTTCGGGTATATCGTTTCGTAATTTCTCAC
TTGGCTTAGCACTCATTGGCCAATGAATGAAGTACAGGTCAACATATT
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