CV884402

Overview
NameCV884402
Unique NameCV884402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.249e-21
Identity = 58/182 (31.87%), Postives = 92/182 (50.55%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DLY IHWP            +PE++L    +   + A    +  G  +SIGVSNF P+ +  ++    I P VNQ+E++P   QR+L E      I   A+SPL       G   ++ +  +  +A  HGKT AQ  +RW ++ G     KS N +R++ N ++FD+ L++ D   I  +
Sbjct:  101 YLDLYLIHWP------------VPEKNL----FVDTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEAWSPL-------GQGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVIPKSVNPQRIESNFDVFDFELSEQDMASISSL 259          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.249e-21
Identity = 65/200 (32.50%), Postives = 103/200 (51.50%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPE-----------EDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGA-------VGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDL++IH+P++ KP    +   P            E++  LD    W A+E+    GL KSIG+SNFS + I  ++   TI P   Q+E +P   Q KLVE+ +   I +T +S  G        +  +  T  ++    +K IA  HGK+ AQV LR+  ++G     +S + +R+ +NL + D+ LT DD   I ++
Sbjct:  109 YVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLD---TWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQIEHHPYLTQPKLVEYVQLHDIQITGYSSFGPQSFLEMDLKRALDTPVLLEEPTVKSIADKHGKSPAQVLLRYQTQRGIAVIPRSNSPDRMAQNLSVIDFELTQDDLQAIAEL 305          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.937e-21
Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = -3
Query:  221 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQ-RRMMPRDD 796
            Y+DLY +HWP            +P  D     Y   W+ M   Q+ GL KSIGV NF    ++ ++    + P +NQ+E++P  QQR+L  +  +  I   ++SPL   G       V + + ++++A  +GKT AQ+ +RW ++ G     KS    R+ EN  ++D+ L  D+  +I ++ Q +R+ P  D
Sbjct:  100 YLDLYLMHWP------------VPAID----HYVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGEG-----VFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAKLDQGKRLGPDPD 271          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: YDG7_SCHPO (Uncharacterized oxidoreductase C26F1.07 OS=Schizosaccharomyces pombe GN=SPAC26F1.07 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.836e-21
Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAK------PSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTN--QVMNNEALKQIAAVHGK--TVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+D Y IHWP+S K      P +K  N I E++ +       W+AME+    G  + IG+SNF+   +E IL  A + P V+Q+E++P   Q + VE  K   I VTA+SP G   + + +   +++ +E +++IA   G+  T A + + W I +G +   KS N++R+K N +     LT +D D+I  I
Sbjct:  111 YLDEYLIHWPVSFKTGEDKFPKDKDGNLIYEKNPIE----ETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPFGNQNTIYESKIPKLIEHETIQKIAKSKGEGVTGATIAVSWAITRGTSVIPKSVNEQRIKSNFKYI--PLTKEDMDEINSI 296          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = -3
Query:  224 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQRRMMPRD 796
            Y+DLY IHWP            +PE +     +   ++A    +  G  +SIGVSNF P+ + T++    I P VNQ+E++P   Q++L +      I   A+SPLG          ++ +  +  IA  HGKT AQV +RW I+ G     KS N ER+  N ++FD+ L+  D   I  +   + +  D
Sbjct:  100 YLDLYLIHWP------------VPENN----KFVDTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGIATEAWSPLGQ-------GSLLADPVITGIAEQHGKTPAQVLIRWHIQLGNIVIPKSVNPERIASNFDVFDFELSGQDITSIASLETGKRLGPD 267          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21
Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = -3
Query:  272 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDD 796
            YVDLY IHWP             P++D     Y   W  +   +  GL +SIGV NF    ++ ++    I PTVNQ+E++P  QQR+L  +  +  I   ++SPL   G       V + E ++++A  + KT AQ+ +RW ++ G     KS    R++EN E+FD+ L  ++
Sbjct:  100 YVDLYLIHWPD------------PKQD----HYVSAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQLHAWNATHHIATESWSPLAQGGKG-----VFDQEIIRKLAQQYNKTPAQIVIRWHLDSGLIVIPKSVTPARIRENFEVFDFKLQKEE 253          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.458e-20
Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = -3
Query:  224 VDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQIPQRRMMPRD 793
            +DL  IHWP    PS     D              W  M + +  GL +SIGVSNF+   ++T++    + P VNQVE++P + Q  L  F     I   ++SPL         ++++  + L+++A V+G T  QV LRW ++ G+T   KS + +R +EN ++F +ALT D  D I  + + R+   D
Sbjct:  103 IDLQLIHWP---NPSVGRWLD-------------TWRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAVNQVELHPYFPQAALRAFHDEHGIRTESWSPLAR------RSELLTEQLLQELAVVYGVTPTQVVLRWHVQLGSTPIPKSADPDRQRENADVFGFALTADQVDAISGLERGRLWDGD 270          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.904e-20
Identity = 66/189 (34.92%), Postives = 94/189 (49.74%), Query Frame = -3
Query:  299 YVDLYFIHWPMSAK---------------PSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGA-------VGSSWGTNQVMNNEALKQIAAVH-GKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEI 796
            Y+DLY+IH+P++ K                 ++ +  I E  +  +D    + A+EEC   GL KSIGVSNF    I+ +L    I P   Q+E +P   Q  LVEFCK   I V A+S  G        +  +  T  +  N+ +K+++  H G T +QV LRW  ++G     KS  KERL  NLEI
Sbjct:  104 YLDLYYIHFPIAFKYVPFEEKYPPGFYTGADDEKKGHITEAHVPIID---TYRALEECVDEGLIKSIGVSNFQGSLIQDLLRGCRIKPVALQIEHHPYLTQEHLVEFCKLHDIQVVAYSSFGPQSFIEMDLQLAKTTPTLFENDVIKKVSQNHPGSTTSQVLLRWATQRGIAVIPKSSKKERLLGNLEI 289          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: KAR_YEAST (NADPH-dependent alpha-keto amide reductase OS=Saccharomyces cerevisiae GN=YDL124W PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.486e-20
Identity = 56/185 (30.27%), Postives = 98/185 (52.97%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRK--LVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMN-NEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            YVDLY +H P  +K            ++  L     W+ ME+  + G  K+IGVSNF+ + ++ IL  A + P VNQ+E +P  Q +   + +FC+   I+V A+SPLG +      +      E +K+++  + K+ AQ+ LRW+ ++G      S   +R+ +   +F + LT ++ DKI ++
Sbjct:  115 YVDLYLLHSPFVSK------------EVNGLSLEEAWKDMEQLYKSGKAKNIGVSNFAVEDLQRILKVAEVKPQVNQIEFSPFLQNQTPGIYKFCQEHDILVEAYSPLGPLQKKTAQDDSQPFFEYVKELSEKYIKSEAQIILRWVTKRGVLPVTTSSKPQRISDAQNLFSFDLTAEEVDKITEL 287          
BLAST of CV884402 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.247e-20
Identity = 64/197 (32.49%), Postives = 100/197 (50.76%), Query Frame = -3
Query:  251 YVDLYFIHWPMSAKP---SEKLRNDIPEEDLVSLDYNGV-----WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVG-------SSWGTNQVMNNEALKQIAAVHGKTVAQVCLRWIIEQGATAAVKSFNKERLKENLEIFDWALTDDDHDKIRQI 796
            Y+DL+ IH+P++ K     EK        D     Y GV     W A+E+    G  +SIG+SNF    I+ +L  A I P V Q+E +P  QQ +L+E+ +S+ I +TA+S  G                 +  ++ +K +A    KT AQV LRW  ++G     KS N +RL  NL++ D+ L+ +D  +I ++
Sbjct:  102 YLDLFLIHFPIAFKFVPFEEKYPPGFYCGDGDKFIYEGVPIIDTWRALEKMVEKGKIRSIGISNFPGALIQDLLRGAKIKPAVLQIEHHPYLQQPRLIEYVQSQGIAITAYSSFGPQSFVELNHPRVKDVKPLFEHDVIKSVAEKANKTPAQVLLRWATQRGLAVIPKSNNPDRLLSNLKVNDFDLSQEDFKEISKL 298          
The following BLAST results are available for this feature:
BLAST of CV884402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
Y1919_MYCSJ2.249e-2131.87Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
XYL1_CANPA2.249e-2132.50NADH-dependent D-xylose reductase OS=Candida parap... [more]
DKGA_SALTY2.937e-2130.572,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
YDG7_SCHPO3.836e-2133.85Uncharacterized oxidoreductase C26F1.07 OS=Schizos... [more]
Y2408_MYCS26.543e-2131.94Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
DKGA_YERPE6.543e-2132.572,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
DKGB_CORSS1.458e-2032.112,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]
GRE3_YEAST1.904e-2034.92NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
KAR_YEAST2.486e-2030.27NADPH-dependent alpha-keto amide reductase OS=Sacc... [more]
XYL1_PICGU3.247e-2032.49NADPH-dependent D-xylose reductase OS=Pichia guill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884402 ID=CV884402; Name=CV884402; organism=Citrus sinensis; type=EST; length=798bp
TTTTGCATAATAGTATTTTATTTATTCATTCCTTGATGAGAAGATAGAGA
GTAAGAGGGAGAAATAAAATGCCTTCTTTTTTTTTTTTTTTTTGCACACA
TACTTGGAGCTAATCGCAGTAGAAATCAATACAGCACGAATTTGATATTA
AAAGCGAGAGATCTATCTACTCATCCCACAAGTCTTCAGGTGTCTTGAAT
GGTCCATTAGGGATAATGAAATCATCTCTAGGCATCATTCTGCGCTGCGG
GATTTGACGGATCTTGTCATGATCGTCATCAGTTAGTGCCCAGTCAAAGA
TCTCCAAGTTCTCTTTCAGTCTCTCCTTGTTGAAGCTCTTAACAGCCGCA
GTTGCCCCCTGCTCAATTATCCATCGAAGACAAACCTGAGCCACAGTTTT
GCCATGAACGGCGGCAATCTGCTTCAGTGCTTCATTGTTCATAACTTGAT
TCGTGCCCCAGCTGGACCCGACGGCTCCCAAAGGAGAGAATGCGGTAACA
ATAATACTTTTGGACTTGCAAAATTCTACGAGCTTTCTCTGTTGCCAGGC
AGGGTTCATCTCCACCTGATTGACAGTAGGAGGGATGGTAGCGAAGGCGA
GTATGGTCTCAATCTTCTTAGGAGAGAAGTTGCTGACACCAATGGACTTA
GTGAGGCCATGCCTCTGGCACTCTTCCATGGCTTCCCACACACCGTTGTA
GTCCAGTGATACAAGATCTTCTTCGGGTATATCGTTTCGTAATTTCTCAC
TTGGCTTAGCACTCATTGGCCAATGAATGAAGTACAGGTCAACATATT
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