CV884401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCA_YEAST (Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=LSC1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.086e-47 Identity = 104/208 (50.00%), Postives = 130/208 (62.50%), Query Frame = -3 Query: 220 LDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEK----PVVAFIAGLTA--PPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVF 822 + L VCITEGIPQHDM+ + L Q KTRL+GPNCPGII P + +IGI P I + G++GI+SRSGTLTYEAV QTT LGQS +G+GGD F GT+F+D L+ FL D T +AA +KE + PV +FIAG A G RMGH+GAIV G A+ K + LR+ GV VVESP +G A+L+ F Sbjct: 118 IPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSLVIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPVASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQF 325
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCD1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus fulgidus GN=sucD1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.550e-45 Identity = 97/189 (51.32%), Postives = 121/189 (64.02%), Query Frame = -3 Query: 256 LDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVES 822 L LVVC+TEGIP +D + + L R+ K+ L+GPNCPG+I PG K+G++P G +G+VSRSGTLTY+ T G+GQST VGIGGDP G FVD L+ F D +T E AA IK+ KPVVAFIAG TAPPG+RMGHAGAI+ G GTA+ K+ LR+AG V E+ Sbjct: 93 LRLVVCVTEGIPLYDEMLIHRKL-REVKSMLLGPNCPGVISPGRSKVGLLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTVVGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ--MSKPVVAFIAGRTAPPGKRMGHAGAIIEGSTGTAEAKMAALRDAGARVAET 278
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCD_THETH (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Thermus thermophilus GN=sucD PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.071e-43 Identity = 97/189 (51.32%), Postives = 120/189 (63.49%), Query Frame = -3 Query: 256 LDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVES 822 + L+V ITEGIP DMVR + +RLIG NCPGII E KIGIMPG++ K GRVGI+SRSGTLTYEA + GLG +T VGIGGDP GT F D L F DP+T E+AAA +K+ +KPVV FI G +AP G+RMGHAGAI+ G GT + K++ EAG+ V ++ Sbjct: 89 IPLIVLITEGIPTLDMVRAVEEIKALG-SRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDH-MKKPVVGFIGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCD_MYCBO (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium bovis GN=sucD PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.186e-40 Identity = 95/201 (47.26%), Postives = 119/201 (59.20%), Query Frame = -3 Query: 223 LDLVVCITEGIPQHDMVRVKAA-LNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEV 822 + L+V ITEGIP D A L KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ + LG ST +GIGGDP GT +D +E F DP T E AA IK + KPVV ++AG TAP G+ MGHAGAIVSG GTA K + L AGV V ++P+ + E+ Sbjct: 102 IPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE--LRDLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIK-TNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREI 299
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCD_MYCTU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium tuberculosis GN=sucD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.385e-40 Identity = 95/201 (47.26%), Postives = 119/201 (59.20%), Query Frame = -3 Query: 223 LDLVVCITEGIPQHDMVRVKAA-LNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEV 822 + L+V ITEGIP D A L KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ + LG ST +GIGGDP GT +D +E F DP T E AA IK + KPVV ++AG TAP G+ MGHAGAIVSG GTA K + L AGV V ++P+ + E+ Sbjct: 102 IPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE--LRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIK-TNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREI 299
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: SUCD_METJA (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Methanocaldococcus jannaschii GN=sucD PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 90/207 (43.48%), Postives = 117/207 (56.52%), Query Frame = -3 Query: 244 PFXXXXXXXXXXXELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKI 864 PF ++L+V ITE IP HD + ++IGPN PGI P K+GI+P + K G VG+VSRSGTLTYE Q G G STCVGIGGDP G + + L+ F D +T E+AA I++ +KPV+ +IAG +AP G+RMGHAGAIV GKGTA+ K+K L EAG V ++ + I Sbjct: 81 PFAKDAVFEAIDAGIELIVVITEHIPVHDTMEF-VNYAEDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK--MKKPVIGYIAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDI 284
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: ACL1_SCHPO (Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces pombe GN=SPBC1703.07 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15 Identity = 61/212 (28.77%), Postives = 100/212 (47.17%), Query Frame = -3 Query: 217 VVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIG--------IMPGYIHKPGRVGIVSRSGTLTYEA--VFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFK 813 + I EG+P+ R +++ +IGP G IKPG KIG I+ +++PG V VS+SG ++ E + T G+ + + IGGD + GT F+D L +F DP +K +KP+VA+ G + + + GHAG+ + TA K + +REAG+ V E+ K+ + + EV++ Sbjct: 114 IAIIAEGVPER-RAREILVTSKEKNVVIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSNELNNIISHTTDGVYEG--IAIGGDRYPGTTFIDHLIRFEADPACKLMVLLGEVGGVEEYRVIEAVKNGTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIYVPETFEKLPALLQEVYE 322
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: ACL1_SORMA (ATP-citrate synthase subunit 1 OS=Sordaria macrospora GN=ACL1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14 Identity = 62/211 (29.38%), Postives = 99/211 (46.92%), Query Frame = -3 Query: 220 VVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIG--------IMPGYIHKPGRVGIVSRSGTLTYEA--VFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVF 813 + I EG+P+ R A + ++ +IGP G IKPG KIG I+ +++ G VG VS+SG ++ E + T G+ + V IGGD + GT F+D L ++ DP +K+ KP+VA+ G A + + GHAGA + TA K K++REAG V ++ + + + +V+ Sbjct: 154 IAIIAEGVPER-RAREIAYVAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELNNIISQTTDGVYEG--VAIGGDRYPGTTFIDHLLRYQADPACKILVLLGEVGGVEEYKVIEAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDTFEDMPALLKQVY 361
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: ACL1_NEUCR (Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa GN=B14D6.310 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14 Identity = 62/211 (29.38%), Postives = 99/211 (46.92%), Query Frame = -3 Query: 220 VVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIG--------IMPGYIHKPGRVGIVSRSGTLTYEA--VFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVF 813 + I EG+P+ R A + ++ +IGP G IKPG KIG I+ +++ G VG VS+SG ++ E + T G+ + V IGGD + GT F+D L ++ DP +K+ KP+VA+ G A + + GHAGA + TA K K++REAG V ++ + + + +V+ Sbjct: 150 IAIIAEGVPER-RAREIAYVAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELNNIISQTTDGVYEG--VAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVIDAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDTFEDMPALLKQVY 357
BLAST of CV884401 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.390e-13 Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = -3 Query: 217 VVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIG--------IMPGYIHKPGRVGIVSRSGTLTYEA--VFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXEDAAALIKESGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFK 813 + I EGIP+ + R Q +IGP G IKPG KIG I+ +++PG V VSRSG ++ E + T G+ + V IGGD + G+ F+D + ++ P IKE KPVV + G A + GHAGA + TA K + L+EAGV V S ++G + V++ Sbjct: 593 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEG--VAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYE 801 The following BLAST results are available for this feature:
BLAST of CV884401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884401 ID=CV884401; Name=CV884401; organism=Citrus sinensis; type=EST; length=866bpback to top |