CV884400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCA_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Neurospora crassa GN=8D4.130 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.863e-71 Identity = 133/216 (61.57%), Postives = 159/216 (73.61%), Query Frame = 1 Query: 199 RYYGSSA---AASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 R Y S++ AA+ + ++ +T+V+ QG TGK GTFH +QAIEYGT +VGG PKK G HL PVF++V+EA ET A A+ I+VPPP + L VCITEGIPQHDMVR+ + L QSKTRL+GPNCPGII PG+CKIGIMPG+IHK GR+GIVSRSGTLTYEAV QTT GLGQS VGIGGDPF+GTNF+DCL+ FL D T Sbjct: 21 RAYSSNSSPYAATINNLKINGDTKVLFQGFTGKQGTFHAQQAIEYGTNVVGGTNPKKAGQTHLDRPVFSNVSEAVKETGATATAIFVPPPLAAAGIEEALQAEIPLAVCITEGIPQHDMVRITSMLKTQSKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVVGIGGDPFSGTNFIDCLKVFLEDGDT 236
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 4.883e-71 Identity = 133/201 (66.17%), Postives = 150/201 (74.63%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +V ++K+T+VICQG TG GTFH+EQAI YGTKMVGGVTP KGGT HLGLPVFN+V EA T A ASVIYVP PF + L+VCITEGIP DM+ K + RLIGPNCPG+I PGECKIGIMPG+IH PG+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G+NF+D L+ F DPQT Sbjct: 2 SVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELG-VRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQT 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCA_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC16E8.17c PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.423e-70 Identity = 125/202 (61.88%), Postives = 151/202 (74.75%), Query Frame = 1 Query: 232 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 P + ++ +T+VI QG TGK GTFH + A++YGTK+VGG PKK GT HLG PVF ++ EA ETKA+AS ++VPPP + L+V ITEGIPQHDM+RV L QSK+RL+GPNCPGII+PG+CKIGIMP +IHKPG +GIVSRSGTLTYEAV QTT LGQS +GIGGDPF GTNF+D L+ FL DP T Sbjct: 33 PNLMINSDTKVIFQGFTGKQGTFHAQHAMDYGTKVVGGTNPKKAGTTHLGKPVFGTIEEAMKETKADASAVFVPPPLAAGAIEEAIAAEVPLIVAITEGIPQHDMLRVSDILKTQSKSRLVGPNCPGIIRPGQCKIGIMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLVIGIGGDPFPGTNFIDALKLFLDDPNT 234
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_BACSU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis GN=sucD PE=1 SV=3) HSP 1 Score: 261.922 bits (668), Expect = 3.499e-69 Identity = 132/201 (65.67%), Postives = 151/201 (75.12%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF++K+TRVI QGITG FHT+Q +EYGT +VGGVTP KGGTE G+PVFN+VAEA T ANASVIYVP PF LDLV+CITE IP DMV+VK + + KTRLIGPNCPG+I P ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q + G+GQST VGIGGDP NGTNF+D L+ F DP T Sbjct: 2 SVFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEGVPVFNTVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK-KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPDT 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_HAEIN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Haemophilus influenzae GN=sucD PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.018e-68 Identity = 126/201 (62.69%), Postives = 151/201 (75.12%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 A+ +DKNT+VICQG TG GTFH+EQA+ YGT++VGGV+P KGGT HLGLPVFN+V EA T A+VIYVP F + L+VCITEGIP DM++VK LN ++ +IGPNCPG+I P ECKIGIMP +IHK G+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G++F+D LE+F DP+T Sbjct: 2 AILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVENTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLN-ETGVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDPIPGSSFIDILERFQQDPET 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_STAAW (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MW2) GN=sucD PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65 Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDET 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_STAAS (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=sucD PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65 Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDET 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_STAAR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=sucD PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65 Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDET 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_STAAN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain N315) GN=sucD PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65 Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDET 201
BLAST of CV884400 vs. ExPASy Swiss-Prot
Match: SUCD_STAAM (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sucD PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65 Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1 Query: 235 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 837 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDET 201 The following BLAST results are available for this feature:
BLAST of CV884400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884400 ID=CV884400; Name=CV884400; organism=Citrus sinensis; type=EST; length=896bpback to top |