CV884399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 4.753e-84 Identity = 149/271 (54.98%), Postives = 202/271 (74.54%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 856 M EK H+N+V+IGHVD GKST G L+++ G I + +I+ ++KEA E K +F++AWV+D+ K ERERG+TID+ KFET KYY T+IDAPGHRDF+KNMITGTSQAD AVL++ + G G+ QT+EHA LA TLGV Q+I NKMDAT P YS+ R++E+ E++ L +G+ + VP +P+SG++GDN+++ S NL W+KGPTL++AL+ + P +P DKPLRLP++DVY I GIGTVPVGR+ETGV+K G V F P+ Sbjct: 1 MASEKPHMNLVIIGHVDHGKSTLVGRLLFEHGEIPQHIIDEYKKEAEEKGKATFEFAWVMDRFKEERERGVTIDLTHRKFETDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREG---EGVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGF--KNVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALNALQVPAKPVDKPLRLPVEDVYSITGIGTVPVGRIETGVMKVGDKVIFMPA 264
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 308.916 bits (790), Expect = 2.359e-83 Identity = 151/271 (55.72%), Postives = 198/271 (73.06%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 856 M +K H+N++ IGHVD GKST G L+++ G I +IE + KEA + K +F++AWV+D+ K ERERG+TID+A KFET KYY T+IDAPGHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV Q++ NKMDAT P +S+ R++E+ + LK +GY + FVPISG++GDN+ + S N+ WYKGP+LL ALD P++P +KPLR+P++DVY I GIGTVPVGRVETGVLKPG V F P+ Sbjct: 1 MASQKPHLNLITIGHVDHGKSTLVGRLLFEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQIVVAINKMDATEPPFSEKRFNEVKADAEKLLKTIGY--KDATFVPISGYKGDNVTKPSPNMPWYKGPSLLQALDAFKVPEKPINKPLRVPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPA 264
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.081e-83 Identity = 146/270 (54.07%), Postives = 197/270 (72.96%), Query Frame = 2 Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKR-SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 +K H+N++V GH+D+GKSTT GH + LG +D+R I + +E+ + K +FKYAWV+D +K ERERGITID+A KFET KY+ T+IDAPGHRDFIKNMITG S+ADCA+L++ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ +K VGY E VPF+P+SG++GDN+++RS N+ WYKG TLL++ D+ ++P KPLR+P+QDVY I G+GTVPVGRVETG +KPG + PSG Sbjct: 7 DKPHLNMIVTGHIDNGKSTTMGHFLMDLGVVDERTIAQHAEESEKTGKGDTFKYAWVMDNIKDERERGITIDLAFQKFETPKYFFTLIDAPGHRDFIKNMITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEKGEGLVKSVGYKLENVPFIPVSGWKGDNLVKRSENMPWYKGKTLLESFDDFKMAEKPVGKPLRVPIQDVYTITGVGTVPVGRVETGTMKPGDKIVVMPSG 274
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.964e-83 Identity = 142/269 (52.79%), Postives = 195/269 (72.49%), Query Frame = 2 Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 +K H+N++VIGHVD GKST G L+ G +D++ I+ E+ A ++ K S KYA++LD+LK ERERG+TI++ +FET K++ T+IDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + R+ EIV +V ++K G++ KV FVP+ G+N+ +RS N+ WY GPTL + LD + P +P DKPLR+P+Q+VY I G+G VPVGRVETGVLK G V F P G Sbjct: 3 QKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKFFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDPPYDEKRFKEIVDQVGKFMKSFGFDMNKVKFVPVVAPTGENITQRSENMKWYTGPTLEEYLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRVETGVLKVGDKVVFMPVG 271
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.608e-82 Identity = 140/269 (52.04%), Postives = 195/269 (72.49%), Query Frame = 2 Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 +K H+N++VIGHVD GKST G L+ G +D++ I+ E+ A ++ K S KYA++LD+LK ERERG+TI++ +FET KY+ T+IDAPGHRDF+KNMITG SQAD A+L + + G FE+G+S +GQTREH +LA T+G+ Q+I KMD P Y + RY+EI + + ++K G++ KV F+PI G+N+ +RS N+ WY GPTL +ALD + P +P DKPLRLP+Q+VY I G+GTVPVGRVE+GV+K G + F P+G Sbjct: 3 QKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPPYDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKRSENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEVYSISGVGTVPVGRVESGVMKVGDKIVFMPAG 271
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.406e-82 Identity = 147/275 (53.45%), Postives = 200/275 (72.73%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 865 M K+K +N+ IGHVD+GKSTT G L+Y G ID +++E+ ++EA E K F++A+V+D LK ERERG+TID+A KFET KY T++D PGHRDFIKNMITG SQAD AVL++D +A QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L KV GYNP+++ F+P + +GDN+++RS N+ WYKGPTL++ALD P++P++ PLR+P+QDVY I G+GTVPVGRVETG+L+PG V F P+G++ Sbjct: 1 MAKQKPVLNVAFIGHVDAGKSTTVGRLLYDSGAIDPQLLEKLKREAQERGKAGFEFAYVMDNLKEERERGVTIDVAHKKFETQKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVDVN----DAKTGIQPQTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQLLKVLGYNPDQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSITGVGTVPVGRVETGILRPGDKVVFEPAGVS 269
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.589e-82 Identity = 143/272 (52.57%), Postives = 193/272 (70.96%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 M +K H+N+ VIGH+D GKST G L+Y G + +IE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA YS+ARY E+V++VS LK +G+ P ++PF+P S F GDN+++ S WYKGP +++AL+++ EP++PS PLR+P++D Y I GIGTVPVGRVETGV+K G V F P G Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHIIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--DYSEARYKEVVEQVSGILKMIGFKPSEIPFIPTSAFHGDNIMKLSDKTPWYKGPAIMEALNSLKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVVFMPGG 263
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.589e-82 Identity = 147/271 (54.24%), Postives = 189/271 (69.74%), Query Frame = 2 Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 865 +K H+N+ VIGHVD GKST G L+++ G + +IE+++ EA E K SF +AWV+D LK ERERG+TIDI+ +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA KYS+ RY+E+ KEVS L VG+ + VPF+P S FEGDN+ + S N WY GP LL+ L+N+ P +P PLR+P+QD Y I GIGTVPVGRVETG++K G VTF PSG T Sbjct: 3 DKPHMNLAVIGHVDHGKSTFVGRLMFETGAVPAHLIEKYKAEAKEKGKESFAFAWVMDTLKEERERGVTIDISHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLSRTLGINQLIVAINKMDAA--KYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSSANTPWYTGPALLECLNNLTVPSKPDTLPLRIPVQDAYTISGIGTVPVGRVETGIMKKGQKVTFMPSGAT 264
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.589e-82 Identity = 145/271 (53.51%), Postives = 190/271 (70.11%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 856 M +K H+N+ VIGH+D GKSTT G ++++ G + +IE + KEA K +F++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S +K VGY PE+ F+PIS +G N+ S WYKGP L+ ALD EP +P+DKPLRLP+QD Y I GIGTVPVGRVETG++K GM V+F P+ Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTTVGRMMFETGAVPAHIIEAYRKEAESKGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQGINIKANSPETPWYKGPALIPALDTFKEPSKPTDKPLRLPIQDSYSISGIGTVPVGRVETGIMKKGMKVSFMPA 262
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.589e-82 Identity = 143/272 (52.57%), Postives = 191/272 (70.22%), Query Frame = 2 Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 M +K H+N+ VIGH+D GKST G L+Y+ G + +IE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+A+Y E+V++VS LK +G+ P +PF+P S F GDN+ + S WYKGP ++ ALD + EP++PS PLR+P++D Y I GIGTVPVGRVETGV+K G V F P G Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTLVGRLMYEAGAVPAHIIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVM-------AQTKEHIFLSRTLGINQLIIAINKMDAV--EYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVIFMPGG 263 The following BLAST results are available for this feature:
BLAST of CV884399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884399 ID=CV884399; Name=CV884399; organism=Citrus sinensis; type=EST; length=866bpback to top |