CV884399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32 Identity = 90/265 (33.96%), Postives = 133/265 (50.19%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD + L L++A+D+ I EP R DKP +P++DV+ I G GTV GRVE G++K G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVG 242
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_CORA7 (Elongation factor Tu OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=tuf PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32 Identity = 97/262 (37.02%), Postives = 142/262 (54.20%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL-DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 823 + K H+NI IGHVD GK+TTT I K + + + +E +F + ++DK E+ERGITI+I+ ++ T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + E+ L + Y+ E+ P V IS EGD +S +D L+ A D+I +P+R DKP +P++D++ I G GTV GRVE G L Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTA-------AITKVLADAYPEE-----NTAFAFD-MIDKAPEEKERGITINISHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEEIIELVEMEIRELLAEQDYD-EEAPIVHISALKALEGDEKWVQSV-ID------LMQACDDSIPDPERELDKPFLMPIEDIFTITGRGTVVTGRVERGSL 238
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32 Identity = 89/262 (33.97%), Postives = 132/262 (50.38%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+TTT + L ++ +E +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L + G++ ++ P V S + + LD L+ A+D I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 8 RNKPHVNIGTIGHVDHGKTTTTAAITMTLAKAGGAEVQNYED---------------IDKAPEEKERGITINTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVNHIVVFLNKADQVD---DPELLELVEMEVRELLSEYGFDGDECPVVVGSALKAIEEGDDQCILD------LMKAVDEYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHVG 238
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: CYSNC_PSEAE (Bifunctional enzyme cysN/cysC OS=Pseudomonas aeruginosa GN=cysNC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.515e-32 Identity = 81/272 (29.78%), Postives = 141/272 (51.84%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 859 + K + + G+VD GKST G L++ I + +E +++ ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+++ID+ G QTR H+ +A LG++ ++ NKMD + + +++I + ++ +K+G + FVP+S +GDN++ +S WY G +L++ L+ + + +R P+Q V + G + +GV++ G V PSG Sbjct: 20 ERKELLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKVGTTGDDVDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARYG-------VQTQTRRHSFIASLLGIRHIVVAINKMD--LKDFDQGVFEQIKADYLAFAEKIGLKTSSLHFVPMSALKGDNVVNKSERSPWYAGQSLMEILETVEIAADRNLDDMRFPVQYVNRPNLNFRGFAGTLASGVVRKGDEVVALPSG 282
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 88/269 (32.71%), Postives = 141/269 (52.42%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 841 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 88/269 (32.71%), Postives = 141/269 (52.42%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 841 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LACLS (Elongation factor Tu OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 93/266 (34.96%), Postives = 137/266 (51.50%), Query Frame = 2 Query: 41 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + + K H+NI IGHVD GK+T + I K + ++ +A + +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GVK +I NK D + + + EV L + + + +P + G + + W K L+D +D I P+R +DKPL LP++DV+ I G GTV GR+E G +K G Sbjct: 5 VYDRSKPHVNIGTIGHVDHGKTTLSA-------AISKVLSDKGYSKATDFAS--------IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVKYLIVFLNKADLVD---DEELMELVEMEVRDLLSEYDFPGDDIPVI-----AGSALGALNGEPQWVAKVEELMDIVDEYIPTPERDTDKPLLLPVEDVFSITGRGTVASGRIERGTVKVG 240
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LACLM (Elongation factor Tu OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 93/266 (34.96%), Postives = 137/266 (51.50%), Query Frame = 2 Query: 41 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + + K H+NI IGHVD GK+T + I K + ++ +A + +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GVK +I NK D + + + EV L + + + +P + G + + W K L+D +D I P+R +DKPL LP++DV+ I G GTV GR+E G +K G Sbjct: 5 VYDRSKPHVNIGTIGHVDHGKTTLSA-------AISKVLSDKGYSKATDFAS--------IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVKYLIVFLNKADLVD---DEELMELVEMEVRDLLSEYDFPGDDIPVI-----AGSALGALNGEPQWVAKVEELMDIVDEYIPTPERDTDKPLLLPVEDVFSITGRGTVASGRIERGTVKVG 240
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LACLA (Elongation factor Tu OS=Lactococcus lactis subsp. lactis GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 93/266 (34.96%), Postives = 137/266 (51.50%), Query Frame = 2 Query: 41 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + + K H+NI IGHVD GK+T + I K + ++ +A + +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GVK +I NK D + + + EV L + + + +P + G + + W K L+D +D I P+R +DKPL LP++DV+ I G GTV GR+E G +K G Sbjct: 5 VYDRSKPHVNIGTIGHVDHGKTTLSA-------AISKVLSDKGYSKATDFAS--------IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVKYLIVFLNKADLVD---DEELMELVEMEVRDLLSEYDFPGDDIPVI-----AGSALGALNGEPQWVAKVEELMDIVDEYIPTPERDTDKPLLLPVEDVFSITGRGTVASGRIERGTVKVG 240
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 96/269 (35.69%), Postives = 134/269 (49.81%), Query Frame = 2 Query: 44 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 MGKEK H+NI IGH+D GK+T T I K+ G+ F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + +P + S + + + D LLDA D+ I EP+R DKP +P++DV+ I G GTV GRVE G++K G Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTA-AITKVAGL--------------RGNGKFVAFDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPYLVVFLNKCDMVD---DEELLELVELEVRELLSLYGFPGDDIPVIRGSALKALE-TDDPNSADAAPVVALLDACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVG 243 The following BLAST results are available for this feature:
BLAST of CV884399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884399 ID=CV884399; Name=CV884399; organism=Citrus sinensis; type=EST; length=866bpback to top |