CV884399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LEUMM (Elongation factor Tu OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 94/269 (34.94%), Postives = 138/269 (51.30%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD----NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+T T I K + E+ +A + + +D E+ERGITI+ + ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + + + +P + + EGD +IE L+D +D+ I EP R +DKP +P++DV+ I G GTV GRV+ GVL G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGVDATDFAE--------IDNAPEEKERGITINTSHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVLKGSALKALEGDPEQVKVIEE-----------LMDTVDSYIPEPARETDKPFLMPVEDVFTITGRGTVASGRVDRGVLTTG 240
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 94/269 (34.94%), Postives = 138/269 (51.30%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD----NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+T T I K + E+ A + + +D E+ERGITI+ + ++ET + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D + + + EV L + + + +P + + EGD +IE L+D +D+ I EPKR +DKP +P++DV+ I G GTV GRV+ GVL G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGITATDFAE--------IDNAPEEKERGITINTSHIEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVIKGSALKALEGDPEQVKVIEE-----------LMDTVDSYIPEPKRETDKPFLMPVEDVFTITGRGTVASGRVDRGVLTTG 240
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_LACBA (Elongation factor Tu OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 95/265 (35.85%), Postives = 137/265 (51.70%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGH+D GK+T T I K + ++ +A + YA + D ERERGITI+ A ++ET K + IDAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD E+ L+D +D+ I P+R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 9 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLADKGLAKAED-------YADI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGDEEQEKVI-------LHLMDVVDDYIPTPERENDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 241
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 90/268 (33.58%), Postives = 136/268 (50.75%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+N+ IGHVD GK+T T + + +D V EK A + +DK E+ RGITI+ A ++ T + + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D + + + EV L K + + +P + S + ++++ + P LLDA+D I P+R +DK +P++DV+ I G GTV GRVE GV K G Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITFTAAAMDPTV----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPARHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQQNPKTARGENPWVDKIWELLDAIDAYIPTPERATDKTFLMPVEDVFTITGRGTVATGRVERGVCKVG 251
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTE (Elongation factor Tu OS=Clostridium tetani GN=tufA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 94/263 (35.74%), Postives = 136/263 (51.71%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+T T + LG + F K +FKY + DK E+ERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + A E+V+ EV + + G+ + P V S + E L+ A+D I P+R +DKP +P++D++ I G GTV GRVE G+LK G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTILGH------KGFAK--------AFKYDEI-DKAPEEKERGITISTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEHIVVFLNKAD----QVDDAELIELVEMEVRELMNEYGFPGDDAPVVVGSALKALENPEDDAATQCIM--DLMAAVDEYIPTPERATDKPFLMPVEDIFTITGRGTVATGRVERGILKVG 242
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31 Identity = 92/263 (34.98%), Postives = 133/263 (50.57%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 826 ++K H+NI IGHVD GK+T T + L + +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + +GD E+S L+DA+D I EP R DKP +P++DV+ I G GTV GR+E G +K Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVLA------------KQGLAQQRDFGS---IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVYLNKVDIADPEL----IELVELELRELLTEYNFPGDDIPIIKGSALKALDGDLEGEKSI-------MELMDAVDEFIPEPLRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.574e-31 Identity = 97/270 (35.93%), Postives = 133/270 (49.26%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGH----LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+N+ IGHVD GK+T T L K GG K+ E +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV +I NK D A E+V+ EV L K + + P + + EGD +++ L +ALD I EP+R DKP +P++DV+ I G GTV GRVE GV+K G Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITTILSKKFGGAAKKYDE-------------------IDSSPEEKARGITINTAHVEYETASRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIIVYMNKADMV----DDAELLELVEMEVRELLSKYDFPGDDTPIIVGSALKALEGD-----QSDIGEPSIIKLAEALDTYIPEPERAIDKPFLMPVEDVFSISGRGTVVTGRVERGVIKVG 242
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.574e-31 Identity = 90/264 (34.09%), Postives = 137/264 (51.89%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 826 + K H+N+ +GH+D GK+T T I K++ +R E ++ +DK ERERGITI A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D E+V+ E+ L K G+ + VP + + E D+ T + L++A+D + +P R DKP +P++DV+ I G GTV GRVE GV++ Sbjct: 8 RTKPHVNVGTVGHIDHGKTTLTA-------AITKQLAKRGRAEFVPFDQ--------IDKAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAADDGPMP-------QTREHILLSRQVGVPYIVVFLNKVDMV----DDPELIELVELELRELLSKYGFPGDDVPIIKGSALRALEADDPEHPDTKCIF----ELMEAIDAYVPDPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIR 241
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_RHOE4 (Elongation factor Tu OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.574e-31 Identity = 100/266 (37.59%), Postives = 143/266 (53.76%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 817 + K H+NI IGHVD GK+TTT I K + + F EA+ ++ +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ EV L ++ E+ P +PIS EGD +S LD L+ A+D +I +P R +DKP +P++DV+ I G GTV GR+E G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTA-------AITKVLADAFPDLNEASAFDQ--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEILELVEMEVRELLAAQEFD-EEAPVIPISALKALEGDPKWTQSI-LD------LMAAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRIERG 236
BLAST of CV884399 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.574e-31 Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 2 Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 832 + K H+NI IGHVD GK+T T I K + ++ + EA + + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + IE DW K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G + G Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTA-------AITKVLAKKGQAEAQDYAE--------IDGAPEERERGITINTAHVEYETEGRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEMIELVEMEIRELLTSYDFPGDDIPVVQVSGLKA---IEGEA--DWETKIDDLMTAVDASIPEPEREIDKPFLMAIEDVFSITGRGTVATGRIERGKVTVG 240 The following BLAST results are available for this feature:
BLAST of CV884399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884399 ID=CV884399; Name=CV884399; organism=Citrus sinensis; type=EST; length=866bpback to top |