CV884393

Overview
NameCV884393
Unique NameCV884393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD1_YARLI (Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Yarrowia lipolytica GN=GPD1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21
Identity = 60/123 (48.78%), Postives = 73/123 (59.35%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTF-FESCGVADLITTCLGGRNRKVAEAFAKNEGK-RSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFV+G   G+N KAAIMR G  EM  FSK  F     +T   ES GVADLIT+C GGRN KV  AF K  G  ++  D+E E+L GQ  QGV T  EV+E+L  +   + FPLF +   I  G
Sbjct:  261 GFVEGKNWGDNAKAAIMRRGMLEMINFSKRFFPETDINTLTVESAGVADLITSCAGGRNFKVGRAFGKESGSGKTIQDVEKELLNGQSAQGVITCNEVHELLKNKNMQKDFPLFESTWGIIHG 383          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD2_PICJA (Glycerol-3-phosphate dehydrogenase [NAD+] 2 OS=Pichia jadinii GN=gpd2 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  348 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFFE-SCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEIC-----VGHFPPSAIVEYSEGKP 755
            GFV+GLE G+N KAA++R G  EM  F +  F     S+F E S GVADL TTC GGRN K+A+  A+    +S  ++E E+L GQ  QG+ TA+E++E++  +G  E FPLF T ++I      +G  P     ++S  KP
Sbjct:  251 GFVEGLEWGDNAKAAMLRRGLLEMIKFGRKFFPGCLVSSFTEESAGVADLFTTCTGGRNFKLAKIMAQTG--KSAHEVEKEILNGQSAQGLITAKEIHELIKNKGCEEEFPLFETTYQILFHGVRIGILPYMLENKWSISKP 390          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD_CANTR (Glycerol-3-phosphate dehydrogenase [NAD+] OS=Candida tropicalis GN=GPD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFF-ESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFV+GL  G+N KAA+MR+G  E   F+KL F+  +  TF  ES GVADLITTC GGRN KV    A  E   + ++ E ++L GQ  QG+ T +EV+E L+    LE FPLF   ++I  G
Sbjct:  258 GFVEGLGWGDNAKAAVMRVGLLETIKFAKLFFNDAEIDTFTGESAGVADLITTCSGGRNVKVGRYMA--ETGCAAEEAEKKLLNGQSSQGIVTTKEVHEFLTNVNKLEEFPLFEATYQITFG 377          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD1_ZYGRO (Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Zygosaccharomyces rouxii GN=GPD1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 61/135 (45.19%), Postives = 80/135 (59.26%), Query Frame = -1
Query:  366 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFF-ESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVGHFP----PSAIVE 755
            GFV GL  GNN  AAI R+G  E+  F ++ F   K  T++ ES GVADLITTC GGRN +VA   AK    +S + +E ++L GQ  QG+ T +EV++ L   G  E FPLF  V++I   + P    PS I E
Sbjct:  252 GFVTGLGWGNNAAAAIQRVGLGEIIKFGRMFFPESKVETYYQESAGVADLITTCSGGRNVRVATEMAKTG--KSGEQVEKDILNGQSAQGLVTCKEVHQWLESSGNTEDFPLFEAVYQITYENVPMKELPSMIEE 384          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD1_CANGA (Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20
Identity = 58/125 (46.40%), Postives = 76/125 (60.80%), Query Frame = -1
Query:  384 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFF-ESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVGHFP 755
            GFV+GL  GNN  AAI R+G  E+  F ++ F   +  T++ ES GVADLITTC GGRN +VA+  AK  GK + D  E E+L GQ  QG+ T +EV+E L        FPLF  V++I   + P
Sbjct:  262 GFVEGLGWGNNAAAAIQRVGLGEIIKFGQMFFPESRVQTYYQESAGVADLITTCSGGRNVRVAKHMAKT-GKSALD-AEKELLNGQSAQGIITCKEVHEWLETCEMTHEFPLFEAVYQIVYNNVP 384          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD2_YEAST (Glycerol-3-phosphate dehydrogenase [NAD+] 2, mitochondrial OS=Saccharomyces cerevisiae GN=GPD2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -1
Query:  402 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFF-ESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEI 755
            GFV+G+  GNN  AAI R+G  E+  F ++ F   K  T++ ES GVADLITTC GGRN KVA   AK  GK +  + E E+L GQ  QG+ T REV+E L      + FPLF  V++I
Sbjct:  302 GFVEGMGWGNNASAAIQRLGLGEIIKFGRMFFPESKVETYYQESAGVADLITTCSGGRNVKVATYMAKT-GKSAL-EAEKELLNGQSAQGIITCREVHEWLQTCELTQEFPLFEAVYQI 418          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD_COLGL (Glycerol-3-phosphate dehydrogenase [NAD+] OS=Colletotrichum gloeosporioides PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 63/123 (51.22%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFS-FVKDSTFFE-SCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFVDG   G+N KAAIMR+G  EM  F K  F   V   TF E S GVADLIT+C GGRN + A+  A  EG  S +++E   L GQ LQG STA+EV   L  RG  + +PLF  VH I  G
Sbjct:  286 GFVDGRGWGDNAKAAIMRVGLLEMVNFGKEFFGQTVHTGTFTEESAGVADLITSCSGGRNFRCAK-MAVAEGL-SVEEIEKRELNGQLLQGTSTAKEVNSFLKARGLEKDYPLFTAVHGILEG 406          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD1_PICJA (Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Pichia jadinii GN=gpd1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKDSTFF--ESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFV GL  G+N  +AI R G  E   F+++ F    +   F  ES GVADLITTC GGRN +VA+A A     +S  ++E E+L GQ  QG+ T++EV+E+L+ +   + FPLF  +++I  G
Sbjct:  258 GFVHGLNWGDNAASAIQRFGLNETIKFAEVFFPGETNQDTFTKESAGVADLITTCSGGRNVRVAKAMAITG--KSAVEVERELLNGQSAQGIITSKEVHELLAAKNLTKEFPLFEAIYQIVYG 378          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD_TRIAT (Glycerol-3-phosphate dehydrogenase [NAD+] OS=Trichoderma atroviride GN=gld1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFS-FVKDSTFFES-CGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFVDG   G+N KAA+MRIG  EM  F K  F   V  +TF ES  GVADLIT+C GGRN + A      E   + D++E + L GQKLQG STA EV   L+ RG  + +PL   V+ I +G
Sbjct:  286 GFVDGRGWGDNAKAAVMRIGLMEMVKFGKEFFGETVHTATFTESSAGVADLITSCSGGRNFRCARKAV--EKGITVDEVEKQDLNGQKLQGTSTAFEVNSFLTARGLEKDYPLLTAVNAILLG 406          
BLAST of CV884393 vs. ExPASy Swiss-Prot
Match: GPD_MAGGR (Glycerol-3-phosphate dehydrogenase [NAD+] OS=Magnaporthe grisea GN=MGG_00067 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  393 GFVDGLEMGNNTKAAIMRIGFREMRAFSKLLFSFVKD--STFFESCGVADLITTCLGGRNRKVAEAFAKNEGKRSFDDLEAEMLQGQKLQGVSTAREVYEVLSPRGWLELFPLFATVHEICVG 755
            GFVDG   G+N ++A++R+G  EM  F++  F    D  +   ES GVAD+IT+C+ GRN + A    K     S  ++E + L GQKLQG STA+EV  +L  RG    +PLF TV+EI  G
Sbjct:  291 GFVDGKGWGSNVQSAVIRVGLAEMLKFAREFFGESVDPFTILLESAGVADVITSCISGRNFRCASMAVKRGV--SVAEIEEKELNGQKLQGTSTAKEVNSLLKARGREGDYPLFTTVNEILEG 411          
The following BLAST results are available for this feature:
BLAST of CV884393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
GPD1_YARLI3.518e-2148.78Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Yar... [more]
GPD2_PICJA6.001e-2142.96Glycerol-3-phosphate dehydrogenase [NAD+] 2 OS=Pic... [more]
GPD_CANTR1.024e-2047.54Glycerol-3-phosphate dehydrogenase [NAD+] OS=Candi... [more]
GPD1_ZYGRO1.024e-2045.19Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Zyg... [more]
GPD1_CANGA1.337e-2046.40Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Can... [more]
GPD2_YEAST2.280e-2048.74Glycerol-3-phosphate dehydrogenase [NAD+] 2, mitoc... [more]
GPD_COLGL1.930e-1951.22Glycerol-3-phosphate dehydrogenase [NAD+] OS=Colle... [more]
GPD1_PICJA5.617e-1943.09Glycerol-3-phosphate dehydrogenase [NAD+] 1 OS=Pic... [more]
GPD_TRIAT9.580e-1948.78Glycerol-3-phosphate dehydrogenase [NAD+] OS=Trich... [more]
GPD_MAGGR2.787e-1843.90Glycerol-3-phosphate dehydrogenase [NAD+] OS=Magna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884393 ID=CV884393; Name=CV884393; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTCCAAAAAAAAACACTTTTGAATATCTAAAACAA
TGCAAAAACAGAAAATACTAGTAGTAAAAGCTTTTGAAGGCTAAAGGCAT
CTCTGAAGCTTGAAGGTTCCTGACACCCTGCATTTTCAGTTCCTTTGATC
GATCTCACTGTTACGGCAACTGATTTTGCATGAGTTAATTACCACCCAAA
AGTTTGTCTAGGCTTTGCTTCTGTTCATGCTGCACAACTTAAAAAAAGTT
TACTTTCAAAACTGTACCTCAAATACGTGAAATATATTACTTCTATCTGG
GGGAAGAGTCAGTAGTACTGAGTAAAGCCTTCCAGTAAAAACAATCTGGG
TTTGCCCTCACTGTACTCAACTATGGCTGACGGGGGGAAATGCCCAACGC
AAATCTCATGCACTGTTGCAAAAAGCGGAAACAGCTCTAGCCATCCACGG
GGGCTTAGCACTTCATAAACTTCTCTTGCAGTTGAAACTCCCTGTAATTT
CTGGCCCTGAAGCATCTCTGCTTCTAAATCATCAAAAGACCTTTTCCCTT
CGTTCTTAGCAAAAGCCTCGGCAACTTTTCTGTTTCTTCCTCCCAAGCAT
GTTGTGATGAGATCAGCTACCCCACAGCTCTCAAAGAAGGTGCTGTCCTT
AACAAATGAAAACAACAACTTGGAAAAGGCTCTCATCTCTCTGAAACCAA
TTCTCATTATTGCAGCCTTAGTGTTATTTCCCATTTCAAGGCCATCAACG
AAACC
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