CV884387

Overview
NameCV884387
Unique NameCV884387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 4.372e-76
Identity = 138/192 (71.88%), Postives = 157/192 (81.77%), Query Frame = -1
Query:  395 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 970
            T  LK+CDFGSAK LV GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIK+LGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F  R PPEA+ L S LL+Y+PS R + LEACAH FFD+LR   T LPN RPLP LFNF+  EL+     L   LIP H R
Sbjct:  256 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRSLGTQLPNNRPLPPLFNFSPGELS-IQPSLNAILIPPHLR 446          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 1.077e-74
Identity = 128/192 (66.67%), Postives = 157/192 (81.77%), Query Frame = -1
Query:  398 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFH-KRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHA 970
            T  LK+CDFGSAK+L+ GE N+SYICSR+YRAPELIFG+T YTT ID+WS+GCVLAELLLGQPLFPGE+G+DQLVEIIK+LGTPT+E+I  MNP YT FKFP+IKA+PW ++F  K +P E++DL+S++L Y PS R   +E CAHPFFD+LRDP TCLP+G+PLP LFNFT  E      +L + LIP HA
Sbjct:  191 TSTLKLCDFGSAKILIKGETNVSYICSRHYRAPELIFGSTNYTTTIDVWSLGCVLAELLLGQPLFPGENGIDQLVEIIKVLGTPTKEQIHAMNPYYTSFKFPEIKANPWPRVFKAKDVPAESIDLISKILLYDPSSRLKPVEICAHPFFDELRDPKTCLPDGKPLPPLFNFTIAEQTSIGPKLAKTLIPSHA 382          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: SGG_DROME (Protein kinase shaggy OS=Drosophila melanogaster GN=sgg PE=1 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.837e-74
Identity = 134/191 (70.16%), Postives = 158/191 (82.72%), Query Frame = -1
Query:  401 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR-DPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEH 970
            T  LK+CDFGSAK L+ GEPN+SYICSRYYRAPELIFGA  YTT ID+WS GCVLAELLLGQP+FPG+SGVDQLVE+IK+LGTPTRE+I+ MNPNYTEFKFPQIK+HPW K+F  R P EA++LVS LL+Y+PS R T L+ACAHPFFD+LR + N  LPNGR +P LFNFT  EL+     L  +L+P+H
Sbjct:  744 TAVLKLCDFGSAKQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNGRDMPPLFNFTEHELS-IQPSLVPQLLPKH 933          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 2.031e-73
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = -1
Query:  395 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIF-HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 970
            T  LK+CDFGSAK LV GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIK+LGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F   + PPEA+ L S LL+Y+PS R + LEACAH FFD+LR     LPN RPLP LFNF+  EL+     L   LIP H R
Sbjct:  256 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSSKTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRRLGAQLPNDRPLPPLFNFSPGELS-IQPSLNAILIPPHLR 447          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 265.388 bits (677), Expect = 3.584e-70
Identity = 130/196 (66.33%), Postives = 157/196 (80.10%), Query Frame = -1
Query:  395 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNG-------RPLPTLFNFTAQELAGASNELRQRLIPEHAR 961
            LK+CDFGSAK+LV GEPN+SYICSRYYRAPELIFGAT+YT AID+WS GCV+AEL+LG PLFPGESG+DQLVEIIKILGTP+RE+IK MNPNY E +FPQI+  P  ++F + +P +ALDL+S++LQY+P+ R TA EA  HPFFD+LRDPNT L N        R LP LFNF+  EL+    +L Q+LIP HAR
Sbjct:  172 LKLCDFGSAKILVAGEPNVSYICSRYYRAPELIFGATDYTHAIDIWSTGCVMAELMLGHPLFPGESGIDQLVEIIKILGTPSREQIKTMNPNYMEHRFPQIRPQPLSRVFSRSVPLDALDLLSKMLQYTPTDRLTAAEAMCHPFFDELRDPNTKLHNSRNPDASPRHLPELFNFSPFELS-IRPDLNQKLIPSHAR 366          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.355e-68
Identity = 117/164 (71.34%), Postives = 141/164 (85.98%), Query Frame = -1
Query:  470 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTL 961
            LK+CDFGSAK LV  EPN+SYICSRYYRAPELIFGAT YT +ID+WS G V+AELLLGQP+FPG+SGVDQLVEIIK+LGTPTRE+I+ MNPNY EFKFPQIKAHPW+K+F    P EA+DL+S++++Y+P+ R T   AC H FFD+LR+P+  LP+GRPLPTL
Sbjct:  176 LKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVMAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRNPDARLPSGRPLPTL 339          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.665e-67
Identity = 117/175 (66.86%), Postives = 144/175 (82.29%), Query Frame = -1
Query:  449 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR-DPNTCLPNGRPLPTLFNFTAQE 970
            T  LK+CDFGSAK L+ GEPN+SYICSRYYRAPELIFG+T+YTT IDMWS GCV++ELLLGQ +FPG+SGVDQ+VEI+K++GTPT E++  MNP+Y +FK P++K HPW K+F  R P EA+DLVS++L YSP+ R + L  CAHPFFD+LR DP+  LPNGR LP LFNFT  E
Sbjct:  170 TGVLKLCDFGSAKQLISGEPNVSYICSRYYRAPELIFGSTDYTTKIDMWSAGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSEQLHDMNPHYKQFKLPELKPHPWSKVFRIRTPAEAIDLVSKMLIYSPNARVSPLMGCAHPFFDELRQDPHQQLPNGRSLPPLFNFTDYE 344          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.841e-66
Identity = 115/164 (70.12%), Postives = 138/164 (84.15%), Query Frame = -1
Query:  470 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTL 961
            LK+CDFGSAK LV  EPN+SYICSRYYRAPELIFGAT YT +ID+WS G V+AELLLGQP+FPG+SGVDQLVEIIK+LGTPTRE+I+ MNPNY EFKFPQIKAHPW+K+F    P EA+DL+S++++Y+P+ R T   AC H FFD+LR P+  LP+GR LP L
Sbjct:  176 LKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVIAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRSPDARLPSGRALPQL 339          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.119e-55
Identity = 106/201 (52.74%), Postives = 136/201 (67.66%), Query Frame = -1
Query:  383 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN--------GRPLPTLFNFTAQELAGASNELRQRLIPEHARK*FD 961
            LK+CDFGSAK+LVP EPN+SYICSRYYRAPEL+FGAT YTT ID+WS  CV+AEL +G+PLFPG+S V+QLVEII++LGTP+  EI  MNPNY     P ++ H    +        A+DL+ ++L Y PS R +A+E   HPFFD+LRDPN C+ +         R LP LFNF   EL+   N L + ++P H  +  D
Sbjct:  165 LKLCDFGSAKVLVPSEPNVSYICSRYYRAPELVFGATHYTTKIDVWSAACVIAELFIGRPLFPGDSSVEQLVEIIRVLGTPSYHEISVMNPNYVNHSLPNVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKRISAIEVLTHPFFDELRDPN-CMYHCSRDEGTIERHLPPLFNFNLAELSIRPN-LNKAILPPHVYESLD 363          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.185e-51
Identity = 96/152 (63.16%), Postives = 119/152 (78.29%), Query Frame = -1
Query:  515 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 970
            T  LK+CDFGSAK L P EPN+SYICSRYYRAPELIFGAT YT  ID+WS GCV+AELLLGQP+FPGESG+DQLVEIIKILGTP+++EI  MNPNY E KFPQIK  P  ++F K+   + ++ ++ +L+Y P  R  AL+    P+FD+L+
Sbjct:  176 TWSLKLCDFGSAKQLKPTEPNVSYICSRYYRAPELIFGATNYTNQIDIWSSGCVMAELLLGQPMFPGESGIDQLVEIIKILGTPSKQEICSMNPNYMEHKFPQIKPIPLSRVF-KKEDDQTVEFLADVLKYDPLERFNALQCLCSPYFDELK 326          
The following BLAST results are available for this feature:
BLAST of CV884387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSK3A_RAT4.372e-7671.88Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
GSK3_DICDI1.077e-7466.67Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
SGG_DROME1.837e-7470.16Protein kinase shaggy OS=Drosophila melanogaster G... [more]
GSK3A_MOUSE2.031e-7370.47Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3_SCHPO3.584e-7066.33Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
GSK3_CAEEL3.355e-6871.34Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
GSK3H_DROME1.665e-6766.86Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
GSK3_CAEBR1.841e-6670.12Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK31_SCHPO1.119e-5552.74Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
MDS1_YEAST2.185e-5163.16Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003B04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884387 ID=CV884387; Name=CV884387; organism=Citrus sinensis; type=EST; length=973bp
TCTCCTCTACTGGTGCATATAATTTCTTTTAAGCAACATGTTCCAAAATA
TTAGTACAATAGAGTTGCCAAAGTAATGAAGACTGGATTTCAGTTTACCG
TCCAGCACAGCCGCAGACAACTTGGGTATTACGGTTCTTGCTGAGAAACT
TGCCATTTTGTGGATGGATTTCATACATGGATCATAAGATTTTCATTCCT
TCTTCCATCCACAACTCACTCCCATCAGCAGATTCATCATAAAAATCCTT
GAGCAGCCTCCCAGCCACGAACCAACTCATTGGTGAAGGGAAAAAAATCG
GTTGCCCTGTAGGGCACAATGGCTTGTGGCATACCTAAGCATCCAAAAAT
TGATTTATATTGCATATGGATCCATCTCAGTCATCAAATCATTTCCTTGC
GTGCTCCGGGATAAGACGTTGTCGCAATTCATTAGAGGCACCAGCCAATT
CTTGAGCAGTGAAATTGAAAAGAGTAGGTAGGGGTCGCCCATTTGGCAAA
CAAGTATTGGGGTCTCTCAAATCATCAAAGAAGGGGTGTGCACATGCCTC
CAAAGCAGTGCATCGTAGGCTTGGTGAATACTGAAGCAACCTTGAGACAA
GATCCAGTGCTTCAGGGGGCATTCGTTTGTGAAATATCTTATGCCATGGA
TGAGCTTTAATTTGAGGGAACTTAAATTCTGTGTAATTTGGATTCATGCA
CTTAATTTCTTCTCTTGTTGGTGTTCCCAGAATCTTAATGATTTCGACGA
GCTGGTCAACTCCACTTTCCCCAGGAAATAAAGGCTGTCCAAGAAGAAGC
TCAGCCAAGACACATCCAATGGACCACATATCAATGGCAGTTGTGTATTC
TGTAGCCCCAAATATAAGTTCCGGGGCCCTGTAATATCTTGAGCAGATAT
ACGATATGTTGGGTTCACCTGGCACCAACATCTTTGCACTTCCAAAGTCA
CATATCTTTAACTGGTGTGTATG
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