CV884387

Overview
NameCV884387
Unique NameCV884387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.991e-45
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = -1
Query:  503 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 970
            T   KICDFGSAK L P +PN+SYICSRYYRAPEL+FGAT Y+  +D+WS  CV+AELLLG+PLF GESG+DQLVEIIKI+G PT++EI  MNPNY +  FP IK     +IF K   P+ LDL+++ L+Y P  R   L+     +FD+ +  +T
Sbjct:  301 TFSFKICDFGSAKCLKPDQPNVSYICSRYYRAPELMFGATNYSNQVDVWSSACVIAELLLGKPLFSGESGIDQLVEIIKIMGIPTKDEISGMNPNYEDHVFPNIKPITLAEIF-KAEDPDTLDLLTKTLKYHPCERLVPLQCLLSSYFDETKRCDT 455          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.744e-35
Identity = 81/183 (44.26%), Postives = 109/183 (59.56%), Query Frame = -1
Query:  446 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE--FKFPQIKAHPWHKI--FHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNG----RPLPTLFNFTAQEL 970
            T  LKICDFGSAK L   +P+ISYICSR+YRAPELI G T+YTT ID+W +GCV+ E+L+G+ +F G+  + QL EI K+LG P +  I   NP Y    F  P        +   +     P+ +DL+ ++L Y P  R +     AH FF++LR+ +T LP G      LP LF+F   EL
Sbjct:  176 TGVLKICDFGSAKKLEHNQPSISYICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYFGHSGPDGIDLLMKILVYEPQQRLSPRRILAHQFFNELRNDDTFLPRGFTEPIKLPNLFDFNDFEL 358          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: GLKA_DICDI (Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.609e-32
Identity = 67/150 (44.67%), Postives = 99/150 (66.00%), Query Frame = -1
Query:  518 QLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT-EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 964
            +L + DFGSAK+L     ++SYICSRYYRAPEL+ G + YTT ID+WSIGC+LAE+L+G+PLFPG +  DQL  II++LG+PT+++++ M P+     + P I    + +  H       +DL+S++  + P  R +  E  AHPF  D+
Sbjct:  221 ELTLADFGSAKILESNHTSMSYICSRYYRAPELLVGCSNYTTKIDIWSIGCILAEMLIGKPLFPGTNSNDQLGRIIEVLGSPTKDDMEAMKPSKPYHLQLPNINP-KFFESLHNVEDKTVVDLLSKIFIFDPVKRASIDEIIAHPFLRDV 369          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 68/192 (35.42%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  404 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK--RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD----PNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 961
            LKICDFG A++    +    Y+ +R+YRAPEL+  +++YT AID+WS+GC+  EL+  +PLFPG   V QL  +++++GTP+ EE++ +N N   +   Q+  +P   I  K   + P A+DL+ ++L + P  R T L+A AHP+ + L D    P   +P        FNF  +  A +  ++++ +  E
Sbjct:  203 LKICDFGLARVTSESDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEEELEFLNENAKRY-IRQLPPYPRQSITDKFPTVHPLAIDLIEKMLTFDPRRRITVLDALAHPYLNSLHDISDEPECTIP--------FNFDFENHALSEEQMKELIYRE 385          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  509 THQLKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 970
            T  LKICDFG A++  P   +      Y+ +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY +   P      W K+F K    +ALDL+ R+L ++P+ R T  EA AHP+ +   DP
Sbjct:  178 TCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDP 337          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  509 THQLKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 970
            T  LKICDFG A++  P   +      Y+ +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY +   P      W K+F K    +ALDL+ R+L ++P+ R T  EA AHP+ +   DP
Sbjct:  178 TCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDP 337          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  509 THQLKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 970
            T  LKICDFG A++  P   +      Y+ +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY +   P      W K+F K    +ALDL+ R+L ++P+ R T  EA AHP+ +   DP
Sbjct:  177 TCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDP 336          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: KOM8_YEAST (Probable serine/threonine-protein kinase YOL128C OS=Saccharomyces cerevisiae GN=YOL128C PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 73/176 (41.48%), Postives = 100/176 (56.82%), Query Frame = -1
Query:  449 KICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDL--VSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRP----LPTLFNFTAQE 958
            K+CDFGSA+ L       +Y CSR+YRAPEL+  + +YTT ID+WS+GC++ E++ GQPLF G+S   QL EI K+LG   +  IK    N  E +   +    + K  H     E  D+  + ++L Y  + RC A +  AH FFD LR+    LP G      LP LFNF+A E
Sbjct:  189 KVCDFGSAQRLDDNTELKTYFCSRFYRAPELLLNSKDYTTQIDIWSLGCIIGEMIKGQPLFKGDSANSQLEEIAKLLGRFPKSSIK----NSQELQ-DSLNDQKFKKFMHWFPSIEFFDVEFLLKVLTYDATERCDARQLMAHEFFDALRNETYFLPRGSSMPVHLPDLFNFSASE 359          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = -1
Query:  404 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK--RMPPEALDLVSRLLQYSPSLRCTALEACAHPF---FDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 961
            LKICDFG A+          Y+ +R+YRAPEL+ G+++YT AID+WS+GC+  E++  +PLFPG+  V+QL  +++++GTP+ EE+  ++  Y +    Q+   P      K   +PP A+DLV ++L + P  R +  EA AHP+   F D+ D   C     P    FNF   E   +  + R+ +  E
Sbjct:  200 LKICDFGLARATPESNLMTEYVVTRWYRAPELLLGSSDYTAAIDVWSVGCIFMEIMNREPLFPGKDQVNQLRLLLELIGTPSEEELGSLS-EYAKRYIRQLPTLPRQSFTEKFPNVPPLAIDLVEKMLTFDPKQRISVKEALAHPYLSSFHDITDEPEC---SEP----FNFDLDEHPFSEEQFRELIYCE 382          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.599e-28
Identity = 63/163 (38.65%), Postives = 100/163 (61.35%), Query Frame = -1
Query:  506 THQLKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 970
            T  LKICDFG A++  P   +      Y+ +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F     P+ALDL+ ++L ++P  R     A AHP+ +   DP+
Sbjct:  163 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQYYDPS 323          
The following BLAST results are available for this feature:
BLAST of CV884387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRK1_YEAST3.991e-4556.41Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]
MCK1_YEAST3.744e-3544.26Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
GLKA_DICDI6.609e-3244.67Probable serine/threonine-protein kinase glkA OS=D... [more]
MPK6_ARATH2.350e-2935.42Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MK03_RAT8.932e-2940.74Mitogen-activated protein kinase 3 OS=Rattus norve... [more]
MK03_MOUSE8.932e-2940.74Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
MK03_HUMAN8.932e-2940.74Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
KOM8_YEAST8.932e-2941.48Probable serine/threonine-protein kinase YOL128C O... [more]
MPK10_ARATH1.990e-2836.13Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MK01_XENLA2.599e-2838.65Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003B04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884387 ID=CV884387; Name=CV884387; organism=Citrus sinensis; type=EST; length=973bp
TCTCCTCTACTGGTGCATATAATTTCTTTTAAGCAACATGTTCCAAAATA
TTAGTACAATAGAGTTGCCAAAGTAATGAAGACTGGATTTCAGTTTACCG
TCCAGCACAGCCGCAGACAACTTGGGTATTACGGTTCTTGCTGAGAAACT
TGCCATTTTGTGGATGGATTTCATACATGGATCATAAGATTTTCATTCCT
TCTTCCATCCACAACTCACTCCCATCAGCAGATTCATCATAAAAATCCTT
GAGCAGCCTCCCAGCCACGAACCAACTCATTGGTGAAGGGAAAAAAATCG
GTTGCCCTGTAGGGCACAATGGCTTGTGGCATACCTAAGCATCCAAAAAT
TGATTTATATTGCATATGGATCCATCTCAGTCATCAAATCATTTCCTTGC
GTGCTCCGGGATAAGACGTTGTCGCAATTCATTAGAGGCACCAGCCAATT
CTTGAGCAGTGAAATTGAAAAGAGTAGGTAGGGGTCGCCCATTTGGCAAA
CAAGTATTGGGGTCTCTCAAATCATCAAAGAAGGGGTGTGCACATGCCTC
CAAAGCAGTGCATCGTAGGCTTGGTGAATACTGAAGCAACCTTGAGACAA
GATCCAGTGCTTCAGGGGGCATTCGTTTGTGAAATATCTTATGCCATGGA
TGAGCTTTAATTTGAGGGAACTTAAATTCTGTGTAATTTGGATTCATGCA
CTTAATTTCTTCTCTTGTTGGTGTTCCCAGAATCTTAATGATTTCGACGA
GCTGGTCAACTCCACTTTCCCCAGGAAATAAAGGCTGTCCAAGAAGAAGC
TCAGCCAAGACACATCCAATGGACCACATATCAATGGCAGTTGTGTATTC
TGTAGCCCCAAATATAAGTTCCGGGGCCCTGTAATATCTTGAGCAGATAT
ACGATATGTTGGGTTCACCTGGCACCAACATCTTTGCACTTCCAAAGTCA
CATATCTTTAACTGGTGTGTATG
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