CV884387

Overview
NameCV884387
Unique NameCV884387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.092e-26
Identity = 68/192 (35.42%), Postives = 110/192 (57.29%), Query Frame = -1
Query:  404 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD---DLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 961
            LKICDFG A+     +    Y+ +R+YRAPEL+  +T+Y+ AID+WS+GC+  EL+  QPLFPG   + Q+  I +++GTPT +E+  + N +  ++    PQ     +  +F  R+ P ALDL+ R+L ++P  R T  EA  HP+ +   D+ D   CL         F+F  ++ A   ++++Q +  E
Sbjct:  176 LKICDFGLARPSSESDMMTEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMF-PRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDIADEPICLEP-------FSFDFEQKALNEDQMKQLIFNE 359          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.092e-26
Identity = 68/192 (35.42%), Postives = 110/192 (57.29%), Query Frame = -1
Query:  404 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD---DLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 961
            LKICDFG A+     +    Y+ +R+YRAPEL+  +T+Y+ AID+WS+GC+  EL+  QPLFPG   + Q+  I +++GTPT +E+  + N +  ++    PQ     +  +F  R+ P ALDL+ R+L ++P  R T  EA  HP+ +   D+ D   CL         F+F  ++ A   ++++Q +  E
Sbjct:  176 LKICDFGLARPSSESDMMTEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMF-PRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDIADEPICLEP-------FSFDFEQKALNEDQMKQLIFNE 359          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26
Identity = 63/188 (33.51%), Postives = 108/188 (57.45%), Query Frame = -1
Query:  404 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 961
            LKICDFG A++    +    Y+ +R+YRAPEL+  +++YT AID+WS+GC+  EL+  +PLFPG   V QL  +++++GTP+  ++  +N N   +  + P  +   + + F   + PEA+DLV ++L + P  R T   A AHP+   L D    + +     T F+F  ++ A    ++++ +  E
Sbjct:  202 LKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKF-PHVHPEAIDLVEKMLTFDPRQRITVENALAHPYLTSLHD----ISDEPVCTTPFSFDFEQHALTEEQMKELIYRE 384          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26
Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = -1
Query:  482 LKICDFGSAKMLVPGEPNISY---ICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE--IKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRP 961
            LK+ DFG AK    G PN +Y   + +R+YRAPEL+FGA  Y   +DMW++GC+LAELLL  P  PG+S +DQL  I + LGTPT E+    C  P+Y  FK FP I   P H IF      + LDL+  L  ++P  R TA +A    +F +   P       RP
Sbjct:  151 LKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI---PLHHIF-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRP 310          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.432e-26
Identity = 68/173 (39.31%), Postives = 96/173 (55.49%), Query Frame = -1
Query:  506 LKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE---IKCMNPNYTEFKFPQIKAHPWHKIF--------------HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 961
            LKICDFG A+ +   E N      Y+ +R+YRAPE++    EYTTAID+WS+GC+LAE+L G+PLFPG    +QL  I+++LGTP  E+   IK           P  K  P+ ++F                 + P ALDL+ +LL ++P+ R T  +A  HP+     DPN
Sbjct:  206 LKICDFGLARSIASQEDNYGFMTEYVATRWYRAPEIMLTFQEYTTAIDVWSVGCILAEMLSGRPLFPGRDYHNQLWLIMEVLGTPNMEDYYNIKSKRAREYIRSLPFCKKIPFSELFANTNNNTSTSNTGGRTNINPLALDLLEKLLIFNPAKRITVEDALKHPYLQLYHDPN 378          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.177e-26
Identity = 67/184 (36.41%), Postives = 102/184 (55.43%), Query Frame = -1
Query:  419 LKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE---IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQ 961
            LKICDFG A+     +    Y+ +R+YRAPEL+   TEYT AID+WS+GC+L EL+  +PLFPG     QL  II +LG+P   +   ++  N        P++  HP+ + F   + P ALDL  R+L + P+ R T  +A  HPF   L + N       P    FNF  ++ + + +++++
Sbjct:  178 LKICDFGLARTTSEADFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILMELIKREPLFPGRDYAQQLGLIIALLGSPEDSDLGFLRSDNARKYVKHLPRVPRHPFSQKF-PDVSPLALDLAERMLVFDPAKRITVEDALNHPFLISLHEINEEPVCDSP----FNFDFEQASLSEDDIKE 356          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.177e-26
Identity = 62/152 (40.79%), Postives = 96/152 (63.16%), Query Frame = -1
Query:  518 LKICDFGSAKML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMP---PEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 961
            LKI D G  +   VP +     I + +YRAPE++ G+T Y+T +D+WS+GC+ AE++  Q LFPG+S + QL+ I ++LGTPT E+   +       +FPQ K     +I  +++P   PE +DL+S++LQY+P+ R +A  A  HP+FD L
Sbjct:  151 LKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHEFPQWKP----QILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSL 298          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: KSS1_YEAST (Mitogen-activated protein kinase KSS1 OS=Saccharomyces cerevisiae GN=KSS1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.149e-26
Identity = 62/164 (37.80%), Postives = 94/164 (57.32%), Query Frame = -1
Query:  506 LKICDFGSAKMLVPGEPN--------ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE---EIKCMNPNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 961
            LK+CDFG A+ L     +          Y+ +R+YRAPE++    EYTTA+D+WS GC+LAE++ G+PLFPG     QL  I+++LGTP+ E   +IK           P     PW  ++ K  + P+ +DL+ ++LQ++P  R +A EA  HP+     DP+
Sbjct:  157 LKVCDFGLARCLASSSDSRETLVGFMTEYVATRWYRAPEIMLTFQEYTTAMDIWSCGCILAEMVSGKPLFPGRDYHHQLWLILEVLGTPSFEDFNQIKSKRAKEYIANLPMRPPLPWETVWSKTDLNPDMIDLLDKMLQFNPDKRISAAEALRHPYLAMYHDPS 320          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.419e-26
Identity = 58/161 (36.02%), Postives = 96/161 (59.63%), Query Frame = -1
Query:  509 THQLKICDFGSAKMLVPGEPNIS----YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 970
            T  LKICDFG A++  P   +      Y+ +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +PLFPG+  +DQL  I+ ++G+P+  +++C+  +         P     PW +++     P ALDL+ ++L ++P  R    +A AHP+ +   DP
Sbjct:  231 TCDLKICDFGLARVTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLNLILAVVGSPSNADLQCIINDKARSYLISLPHKPKQPWARLY-PGADPRALDLLDKMLTFNPHNRIDIEQALAHPYLEQYYDP 390          
BLAST of CV884387 vs. ExPASy Swiss-Prot
Match: MK15_MOUSE (Mitogen-activated protein kinase 15 OS=Mus musculus GN=Mapk15 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.419e-26
Identity = 61/162 (37.65%), Postives = 95/162 (58.64%), Query Frame = -1
Query:  506 QLKICDFGSAKML--VP----GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWH---KIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 964
            ++K+CDFG A+ L  +P    G+    Y+ +R+YRAPE++  +  YT  +DMWS+GC+L E+L GQPLFPG S   QL  I+K +  P+ EE++ +  +Y+      + + P      +     PPEALDL+ RLL ++P  R +A +A  HP+      P+
Sbjct:  151 RVKLCDFGLARSLGDLPEGPGGQALTEYVATRWYRAPEVLLSSRWYTPGVDMWSLGCILGEMLRGQPLFPGTSTFHQLELILKTIPLPSMEELQDLGSDYSALILQNLGSRPQQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHPYVQRFHCPD 312          
The following BLAST results are available for this feature:
BLAST of CV884387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK5_ORYSJ1.092e-2635.42Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI1.092e-2635.42Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MAPK_PEA1.426e-2633.51Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
CDK7_HUMAN1.426e-2643.37Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
ERK1_CANAL2.432e-2639.31Extracellular signal-regulated kinase 1 OS=Candida... [more]
NTF6_TOBAC3.177e-2636.41Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
CKB11_ORYSJ3.177e-2640.79Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
KSS1_YEAST4.149e-2637.80Mitogen-activated protein kinase KSS1 OS=Saccharom... [more]
SUR1_CAEEL5.419e-2636.02Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]
MK15_MOUSE5.419e-2637.65Mitogen-activated protein kinase 15 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003B04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884387 ID=CV884387; Name=CV884387; organism=Citrus sinensis; type=EST; length=973bp
TCTCCTCTACTGGTGCATATAATTTCTTTTAAGCAACATGTTCCAAAATA
TTAGTACAATAGAGTTGCCAAAGTAATGAAGACTGGATTTCAGTTTACCG
TCCAGCACAGCCGCAGACAACTTGGGTATTACGGTTCTTGCTGAGAAACT
TGCCATTTTGTGGATGGATTTCATACATGGATCATAAGATTTTCATTCCT
TCTTCCATCCACAACTCACTCCCATCAGCAGATTCATCATAAAAATCCTT
GAGCAGCCTCCCAGCCACGAACCAACTCATTGGTGAAGGGAAAAAAATCG
GTTGCCCTGTAGGGCACAATGGCTTGTGGCATACCTAAGCATCCAAAAAT
TGATTTATATTGCATATGGATCCATCTCAGTCATCAAATCATTTCCTTGC
GTGCTCCGGGATAAGACGTTGTCGCAATTCATTAGAGGCACCAGCCAATT
CTTGAGCAGTGAAATTGAAAAGAGTAGGTAGGGGTCGCCCATTTGGCAAA
CAAGTATTGGGGTCTCTCAAATCATCAAAGAAGGGGTGTGCACATGCCTC
CAAAGCAGTGCATCGTAGGCTTGGTGAATACTGAAGCAACCTTGAGACAA
GATCCAGTGCTTCAGGGGGCATTCGTTTGTGAAATATCTTATGCCATGGA
TGAGCTTTAATTTGAGGGAACTTAAATTCTGTGTAATTTGGATTCATGCA
CTTAATTTCTTCTCTTGTTGGTGTTCCCAGAATCTTAATGATTTCGACGA
GCTGGTCAACTCCACTTTCCCCAGGAAATAAAGGCTGTCCAAGAAGAAGC
TCAGCCAAGACACATCCAATGGACCACATATCAATGGCAGTTGTGTATTC
TGTAGCCCCAAATATAAGTTCCGGGGCCCTGTAATATCTTGAGCAGATAT
ACGATATGTTGGGTTCACCTGGCACCAACATCTTTGCACTTCCAAAGTCA
CATATCTTTAACTGGTGTGTATG
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