EH406505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 5.544e-28 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 3 Query: 6 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 + LHD++E+ +E+ L HSE+LA+ +GL++TP PL++IKNLRICGDCH IK +S GRE+ +RD RFHHF+DG CSCGD+W Sbjct: 675 FALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 7.241e-28 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 V+ D+DE+ K ++L+YHSERLA+A+ LISTP P+ ++KNLR C DCH AIK++SKIV RE+ VRD RFHHF +G CSCGDYW Sbjct: 741 VVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.457e-28 Identity = 52/89 (58.43%), Postives = 69/89 (77.53%), Query Frame = 3 Query: 9 VLHDIDEE----AKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 VLH ++EE KE+ L HSE++A+A+GLIST P+R+ KNLR+CGDCHNA+K +S + GRE+++RD RFHHF+DGKCSC DYW Sbjct: 762 VLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.235e-27 Identity = 51/87 (58.62%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 3 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 R LHD+++E KE+ L YHSERLAIA+GLI+T + ++KNLR+C DCH IK++S +VGRE+++RD RFHHF++G CSCGDYW Sbjct: 611 RSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27 Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 V HD+ EE K + L+ HSE+LA+ YGLI T +R+ KNLRIC DCHNA K++SK++ RE++VRDNKRFHHF++G CSCGDYW Sbjct: 886 VQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27 Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 3 Query: 6 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 +V HD++E K K L YHSERLAIA+GLI P P+R+ KNLR+C DCHNA K +S + GRE++VRD RFH F+DG CSCGD+W Sbjct: 658 FVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.107e-27 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 3 Query: 12 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 LHD++EE +E ++ HSERLAIA+GLI+T P +RIIKNLR+C DCH K++SKI R ++VRD RFHHF+DG CSCGDYW Sbjct: 709 LHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.107e-27 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 VL D++E+ KE AL YHSE+LAIA+ L+ T P P+RIIKNLRICGDCH +K++SK+ RE++VRD RFHHFRDG CSC D+W Sbjct: 489 VLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.751e-27 Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 VL +++EE KE AL++HSE+LAIA+GLIST P L I+KNLR+C +CH A K++SKI RE+I RD RFHHFRDG CSC DYW Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.751e-27 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 18 DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 D+DEE KE ++ HSE+LAIAYG++ T P +RI+KNLR+C DCH K++S++ GRELIVRD RFHHFR+G CSC DYW Sbjct: 541 DVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622 The following BLAST results are available for this feature:
BLAST of EH406505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406505 ID=EH406505; Name=EH406505; organism=Citrus sinensis; type=EST; length=433bpback to top |