EH406505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.594e-27 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 3 Query: 6 YVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 +V D++EE KE+ L YHSE+LA+A GLIST +R++KNLR+CGDCH +K++SKI RE++VRDN RFH F +G CSC DYW Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.594e-27 Identity = 49/86 (56.98%), Postives = 72/86 (83.72%), Query Frame = 3 Query: 9 VLH-DIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 V+H +++++ KE L+YHSE+LAI +GL++TPP +R++KNLR+C DCHNA K++S I GR++++RD +RFHHF DGKCSCGD+W Sbjct: 518 VVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP170_ARATH (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana GN=PCMP-H75 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 1.046e-26 Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 3 Query: 3 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 R LHDID+E+KE L HSER+A A ++++ PR P +IKNLR+C DCHNA+KIMS IVGRE+I RD KRFH ++G C+C DYW Sbjct: 529 RMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H63 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.366e-26 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 3 Query: 3 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 + LHD+D+E+K++ L H+ER A + TP R +R++KNLR+C DCHNA+K+MSKIVGRELI RD KRFHH +DG CSC +YW Sbjct: 451 KLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.329e-26 Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 VLHD+DEE KE L HSE+LA+A+ L+ P P+RIIKNLR+C DCH A K +S I RE+ +RD RFHHF +GKCSCGDYW Sbjct: 566 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.973e-26 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 12 LHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 +HDI+EE KE HSE+LA+ G + T P +RIIKNLRICGDCH+ +K +SKI R++++RD ++FHHF+DG+CSCGDYW Sbjct: 582 IHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.973e-26 Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 3 Query: 27 EEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 E +E L +HSE+LA+A+GL+ST L ++KNLRICGDCHNAIK MS + GRE+IVRDN RFH F+DGKCSCGDYW Sbjct: 643 EGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP427_ARATH (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.189e-26 Identity = 47/87 (54.02%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 3 RYVLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 +++L D+DE+ +E+ +YHSE+LAIAYGL++TP PL+I +N RIC +CH ++ +S + GRE++VRD RFHHF++GKCSCG YW Sbjct: 615 QHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.189e-26 Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 3 Query: 9 VLHDIDEEAKEKALQYHSERLAIAYGLISTPPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 V+ DIDEE KE AL HSE+ AIA+G++S +P+RI+KNLR+CGDCH ++SKI RE+IVRD RFHHF+DG CSC +W Sbjct: 528 VMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
BLAST of EH406505 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.777e-26 Identity = 48/87 (55.17%), Postives = 70/87 (80.46%), Query Frame = 3 Query: 6 YVLHDIDEEAKEKALQYHSERLAIAYGLIST-PPRMPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGKCSCGDYW 263 + L+D+++E KE+ L YHSE+LA+A+ L + +P+RI+KNLR+CGDCH+A K +SKI GR++I+RD+ RFHHF+DG CSC D+W Sbjct: 909 FALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995 The following BLAST results are available for this feature:
BLAST of EH406505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EH406505 ID=EH406505; Name=EH406505; organism=Citrus sinensis; type=EST; length=433bpback to top |