CV884305

Overview
NameCV884305
Unique NameCV884305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.985e-76
Identity = 129/196 (65.82%), Postives = 152/196 (77.55%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVGA K + RD+V++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI+ GD+LWV RY+L R+ E  GV +SF PKP++GDWNGAG H N ST+ MR  GG   I++AI+KL  RH EHI  YG  NE RLTG+HETA + TF  GVANRGASIR+ R   KEG GYFEDRRPASN+DPY+VT +I ET
Sbjct:  155 GPYYCGVGAGKVYARDVVEAHYRACLYAGLRISGINAEVMPSQWEFQVGPCTGITMGDELWVGRYLLHRVAEEFGVKVSFHPKPLKGDWNGAGCHTNVSTREMRQPGGMRYIEEAIDKLSKRHKEHIKLYGSDNELRLTGRHETASMATFSSGVANRGASIRIPRSVSKEGFGYFEDRRPASNIDPYLVTGIICET 350          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.043e-75
Identity = 132/201 (65.67%), Postives = 153/201 (76.12%), Query Frame = -2
Query:  255 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 857
            GPYYCG G  K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L RI E  G+ +SF PKP+ GDWNGAG H NYSTK MR  GG + I +AIEKL  RH+EHIA YGE N+ RLTG+HET  I  F  GVANRGASIRV R    +G GY EDRRPASN+DPY VT +I ETT+L K
Sbjct:  154 GPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGIKVSFHPKPLAGDWNGAGCHTNYSTKVMREPGGMKYIDEAIEKLSKRHAEHIAVYGEDNDLRLTGRHETGHIGDFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTGIIVETTVLDK 354          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.034e-75
Identity = 126/196 (64.29%), Postives = 152/196 (77.55%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVGA K + RD++++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI  GDQLW+ARY L R+ E  G+ +SF PKP++GDWNGAG H N STK MR  GG + I++AIEKL  RH+EHI  YG  N+ RLTG+HETA +  F  GVANRG+SIR+ R   KEG GYFEDRRPASN+DPY+VT ++ ET
Sbjct:  156 GPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCET 351          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.153e-74
Identity = 126/196 (64.29%), Postives = 153/196 (78.06%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVG  K + RDIV++HY+ACLYAG+ ISGIN EVMP QWE+QVGP  GI  GD LW++R++L R+ E  GV +SFDPKPI+GDWNGAG H N ST S R +GG + I+  ++KL  RH EHIA YGEGNE RLTG+HET +I+ F +GVA+RG SIR+ R   K+GKGYFEDRRPASN DPY +T +IAET
Sbjct:  144 GPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISGINAEVMPSQWEYQVGPCHGIEMGDHLWISRFLLHRVAEEFGVKISFDPKPIKGDWNGAGLHTNVSTTSTRAEGGIKAIESYMKKLEARHVEHIAVYGEGNEERLTGRHETGNIDKFSYGVADRGGSIRIPRQVAKDGKGYFEDRRPASNADPYQITGIIAET 339          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_XENLA (Glutamine synthetase OS=Xenopus laevis GN=glul PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.569e-74
Identity = 132/203 (65.02%), Postives = 153/203 (75.37%), Query Frame = -2
Query:  261 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 857
            GPYYCGVGADK +GRD+V+SHYKACLYAGI I G N EVMP QWEFQVGP  GI  GD LW+AR+IL R+ E  GVV + DPKP+ G+WNGAG H NYST+SMR +GG + I+ AIEKLG RH  HI  Y    G+ N RRLTG+HET+ I+ F  GVANRGASIR+ R   +EG GYFEDRRPA+N DPY VT  +  TTIL
Sbjct:  159 GPYYCGVGADKVYGRDVVESHYKACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYSTESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVANRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTIL 361          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.569e-74
Identity = 126/196 (64.29%), Postives = 153/196 (78.06%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVG  K   RDIV++HYK CLYAG+ ISG N EVMP QWEFQVGP  GI  GD LW+AR++L R++E  G  +SFDPKPI GDWNGAG H N+ST++MR +GG + I+ AI+KL  RH EHIA YGEGN++RLTG+HET  I++F +GVANRGASIR+ R+   +G GYFEDRRPASN DPY +T +I ET
Sbjct:  160 GPYYCGVGTGKVVQRDIVEAHYKCCLYAGVKISGTNAEVMPAQWEFQVGPCDGIEMGDHLWLARFLLHRVSEEFGAKVSFDPKPIPGDWNGAGLHTNFSTENMRKEGGMKYIEDAIKKLEARHKEHIAVYGEGNDKRLTGRHETGSIDSFTYGVANRGASIRIPRECGAKGYGYFEDRRPASNADPYQITGIIMET 355          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.722e-74
Identity = 129/196 (65.82%), Postives = 152/196 (77.55%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVG  K   RDIVD+HYKACLY+G+ ISG N EVMP QWEFQVGP VGI  GD LW+AR++L RI E  G  +S DPKPI GDWNGAG H+N+STK MR +GG + I+ AI+KL  RH EHIA YGEGNE+RLTG+HET  I+ F +GVANRGASIR+ R+   +G GYFEDRRPASN DPY +T ++ ET
Sbjct:  158 GPYYCGVGTGKVVQRDIVDAHYKACLYSGVKISGTNAEVMPAQWEFQVGPCVGIEMGDHLWLARFLLARIAEEFGAKVSVDPKPIPGDWNGAGLHSNFSTKEMRVEGGMKHIEAAIKKLEGRHKEHIAVYGEGNEKRLTGRHETGAIDQFSYGVANRGASIRIPREYTAKGYGYFEDRRPASNADPYRITGILMET 353          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.761e-74
Identity = 124/196 (63.27%), Postives = 155/196 (79.08%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVG  K + RDIV++HYKACL+AGI ISGIN EV+P QWEFQVGP VGI  GD LW++RY+L R+ E  GV +SF PKPI GDWNG+G H N ST++MR++GG + I++AI+KL  RH+EHIA YG+ N  RLTG+HET +I+ F +GVA+RG+SIR+ R   KEGKGYFEDRRPASN  PY +T ++ ET
Sbjct:  158 GPYYCGVGTGKVYCRDIVEAHYKACLFAGIKISGINAEVLPSQWEFQVGPCVGIEMGDHLWISRYLLHRVAEEFGVKISFHPKPIPGDWNGSGLHTNVSTQAMRDEGGMKAIEEAIQKLSTRHAEHIAVYGDDNTLRLTGRHETGNIDAFSYGVADRGSSIRIPRSCAKEGKGYFEDRRPASNACPYQITGIMMET 353          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.844e-73
Identity = 122/196 (62.24%), Postives = 153/196 (78.06%), Query Frame = -2
Query:  270 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 857
            GPYYCGVG  K + RD++++HY+ACL+AG++ISGIN EVMP QWEFQVGP  GI  GD+LW+ARY+L+R+ E  GV +SF PKP++G+WNGAG H N STKSMR  GG + I+ A+ KL  RH EH+  YG  N++RLTG+HETA I  F  GVANRGAS+R+ R   KEG GYFEDRRPASN+DPY+VT ++ ET
Sbjct:  155 GPYYCGVGTGKVYARDLIEAHYRACLHAGVDISGINAEVMPSQWEFQVGPCEGIQMGDELWIARYLLQRVAEEFGVKVSFHPKPLKGEWNGAGCHTNVSTKSMRLPGGMKSIEVALSKLAKRHKEHMLLYGADNDQRLTGRHETASIEGFSSGVANRGASVRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMVET 350          
BLAST of CV884305 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.327e-73
Identity = 129/203 (63.55%), Postives = 153/203 (75.37%), Query Frame = -2
Query:  261 GPYYCGVGADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 857
            GPYYCGVGADKA+GRDIV++HY+ACLYAG+ I G N EVMP QWEFQVGP  GI  GD LW+AR+IL R+ E  GV++SFDPKPI G+WNGAG H N+STK+MR DGG + I++AIEKL  RH  HI AY    G  N RRLTG HET+ I+ F  GVANRGASIR+ R+   E KGYFEDR P++N DPY VT  +  T +L
Sbjct:  159 GPYYCGVGADKAYGRDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVANRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLL 361          
The following BLAST results are available for this feature:
BLAST of CV884305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GLNA_ASHGO7.985e-7665.82Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA_SUIBO1.043e-7565.67Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_YEAST3.034e-7564.29Glutamine synthetase OS=Saccharomyces cerevisiae G... [more]
GLNA_EMENI1.153e-7464.29Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA_XENLA2.569e-7465.02Glutamine synthetase OS=Xenopus laevis GN=glul PE=... [more]
GLNA_NEUCR2.569e-7464.29Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA_COLGL5.722e-7465.82Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_TUBBO9.761e-7463.27Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2... [more]
GLNA_DEBHA4.844e-7362.24Glutamine synthetase OS=Debaryomyces hansenii GN=G... [more]
GLNA_CHICK6.327e-7363.55Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002E09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884305 ID=CV884305; Name=CV884305; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTGACAAAGGATTGACCCTTCCATAATGTTATTAAATTAAATGTTT
ACATTATTCAACCCAATATGACAGCAGGAAGCAAAGAACCCACTGTTGCA
AATACAGGGGCAGAGATTGAAACAAGACAAAAGCTGAACTACTACTAATA
AAGCATCCTTAGCAGAACACAATTCTGTCGTGAACTCGTGAATCCTGAGT
AAAGCCAGCAGATCAAACAAAATATTTCAAAGGTTGCTAGAGGAGCATTC
ATGGCTTCCACAGAATAGTGGTTTCTGCAATCATGGAGGTGACAACATAT
GGATCCATGTTAGAAGCAGGTCTCCTGTCCTCAAAGTAACCCTTTCCTTC
TTTCTCTGTGTCTCGTCCAACACGGATTGATGCCCCACGGTTAGCAACAC
CCCATTTGAAAGTGTTGATGTCAGCTGTTTCATGTTTGCCAGTGAGTCGG
CGTTCATTGCCTTCACCATATGCGGCAATGTGCTCACTGTGCCTCAGTCC
AAGTTTCTCAATTGCTTTCTTAATAACCTCAAAGCCTCCATCGTTCCTCA
TCGACTTGGTGCTGTAATTTGCGTGAGCACCAGCTCCATTCCAGTCACCC
TGAATTGGCTTGGGATCGAAAGAAAGCACAACTCCAGCAATCTCTGTAAT
CCTCTCTAAAATATAGCGGGCAACCCACAACTGATCTCCAGCAGAAATTC
CAACAGCGGGACCAACTTGGAACTCCCACTGCCCCGGCATGACTTCTCCA
TTGATGCCACTGATGTTGATTCCTGCATATAGACAGGCCTTGTAATGGGA
GTCCACAATGTCACGCCCCCAAGCTTTGTCAGCACCAACACCACAGTAGT
ATGGTCCC
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