CV884262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27 Identity = 60/137 (43.80%), Postives = 87/137 (63.50%), Query Frame = -3 Query: 179 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 589 KRL ++ + L GI+ P +++ W A + GP DT ++ +KLTL+F DYP KPP V+F + +HPN+ G+ICLDIL+ W+ YDV IL S+QSLL +PN SP N++AA M+S N+ EY + + E Sbjct: 33 KRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWS-NQTEYKKVLHE 168
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27 Identity = 54/137 (39.42%), Postives = 88/137 (64.23%), Query Frame = -3 Query: 179 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 589 +R++++ +RL +P GIS +P + ++ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ E +E Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKE 144
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27 Identity = 53/130 (40.77%), Postives = 87/130 (66.92%), Query Frame = -3 Query: 200 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 589 +R++++ +RL +P GIS +P ++++ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ E Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAE 137
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.865e-27 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = -3 Query: 164 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 607 M++ A L + K L + P G S G + +I W+ I GP DT ++GG F + F ++YPN PPTVRF S M+HPN+Y+DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ + + + E+ ++V V +S Sbjct: 1 MASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKS 162
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27 Identity = 52/130 (40.00%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 200 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 589 +R++++ +RL +P GI P +++ ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27 Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = -3 Query: 167 LAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 619 + V+ + KRL ++ L GIS P +I W I GP +T + G T++L+L F YP P V+F++ FHPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN SP N++AA M+++ K EY + + E+ Sbjct: 25 MPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKKYLDAFYEK 174
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = -3 Query: 182 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 607 MS A RL ++ K ++D P G P N ++M W I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + IL IQ LL +PN PA +EA ++ +N+ EY +RVR Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26 Identity = 52/137 (37.96%), Postives = 87/137 (63.50%), Query Frame = -3 Query: 179 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 589 KR++++ ++L DP GI+ P D+++ + I GP+ +P++ G F+L L +DYP + P VRF+++++HPNI G ICLD+L+ WSP + +L SIQ+LL PNPN P ++ A + +N++ + RE Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKARE 142
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26 Identity = 52/130 (40.00%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 200 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 589 +R++++ +RL +P GI P +++ ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQ 135
BLAST of CV884262 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = -3 Query: 182 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 607 MS A RL ++ K ++D P G P N ++M W I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + IL IQ LL +PN PA +EA ++ +N+ EY +RVR Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149 The following BLAST results are available for this feature:
BLAST of CV884262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884262 ID=CV884262; Name=CV884262; organism=Citrus sinensis; type=EST; length=816bpback to top |