EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_HELPH (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain HPAG1) GN=clpP PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/168 (58.93%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+   G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G++I+DTM  IRPDVST+C+G AASMGAFLLS GAKGKR+SLP+SRIMIHQPLGGAQG  +DI+I +NE+L  K  +N  LA ++GQSLE+I ++TDRD+++S K+ K+
Sbjct:   15 ERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKE 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_HELPG (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain G27) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/168 (58.93%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+   G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G++I+DTM  IRPDVST+C+G AASMGAFLLS GAKGKR+SLP+SRIMIHQPLGGAQG  +DI+I +NE+L  K  +N  LA ++GQSLE+I ++TDRD+++S K+ K+
Sbjct:   15 ERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKE 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/167 (59.28%), Postives = 134/167 (80.24%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + R++   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ I+PDVST+C+GLAASMGAFLL++GAKGKR++LPNSR+MIHQPLGGA+G  +DI+I A E+L+ K  LN  LA HTGQ +E+I ++TDRD F+S    K
Sbjct:   38 ERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAK 204          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + R++   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ I+PDVST+C+GLAASMGAFLL++GAKGKR++LPNSR+MIHQPLGGA+G  +DI+I A E+L+ K  LN  LA HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAK 204          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SHISS (ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei (strain Ss046) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/162 (61.11%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SHIFL (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/162 (61.11%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SHIF8 (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri serotype 5b (strain 8401) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/162 (61.11%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SHIDS (ATP-dependent Clp protease proteolytic subunit OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/162 (61.11%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SHIBS (ATP-dependent Clp protease proteolytic subunit OS=Shigella boydii serotype 4 (strain Sb227) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/162 (61.11%), Postives = 130/162 (80.25%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_METPP (ATP-dependent Clp protease proteolytic subunit OS=Methylibium petroleiphilum (strain PM1) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.581e-52
Identity = 99/165 (60.00%), Postives = 134/165 (81.21%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + R+I   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AG++IFDTM+ I+PDVST+C+G+AASMGAFLL+AGAKGKR++LPNSR+MIHQP GGAQG  TDI+I A E+L  + +LNG LA  TGQ LEKI  +++RDYF+S ++
Sbjct:   23 ERAYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLSIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRVMIHQPSGGAQGQATDIEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEE 187          
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_HELPH1.976e-5258.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPG1.976e-5258.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURVG1.976e-5259.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURS31.976e-5259.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHISS2.581e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIFL2.581e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIF82.581e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIDS2.581e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIBS2.581e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_METPP2.581e-5260.00ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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