EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.334e-53
Identity = 105/183 (57.38%), Postives = 138/183 (75.41%), Query Frame = 2
Query:   62 PVHAQGPPPANPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            P+     P   P  Q ++  + ++L   RII  G  VDD++AN I+A +LYLD+ DP KDI +Y+NSPGGSV+AG+AI+DTM+H+R DV+T+CVGLAASMG+FLL+AGAKGKR SLP+SRIMIHQPLGGAQG  TDI I A E+L+ K  LN  L+  TGQ LE+I ++TDRD+F+S +  K+
Sbjct:    2 PIGIPKVPYRLPGGQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQ 184          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.049e-53
Identity = 106/173 (61.27%), Postives = 131/173 (75.72%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGA------VDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  GG       +DD +A+ IVAQLL+LDA DP KDI +Y+NSPGGSVTAGMAI+DTMKHIRPDV T+C GLAASMGAFLLS G  GKR +LPN+RIMIHQPLGGAQG   DI+I A E+L+ K  LN  L+ HTGQ +E+I  +T+RD+F+S ++ K
Sbjct:   40 ERAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAK 212          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.981e-53
Identity = 99/167 (59.28%), Postives = 132/167 (79.04%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  G A+DD++AN IV+QLL+L A D  KDI +Y+NSPGGSVTAGMAI+DTM+HI+PDV T+C+G+AASMG+FLL+AGAKGKR++LPN+ +MIHQPLGGAQG  T+I+I+A  +L  +  LN  LA  TGQ +EKI ++TDRD F++  + K
Sbjct:   15 ERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAK 181          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.981e-53
Identity = 100/168 (59.52%), Postives = 132/168 (78.57%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + R I  GG +DD +AN+++AQ+L+L+A DP KDI +Y+NSPGG +TAGMAI+DTM++I+PDVST+C+G AASMGAFLL+AGAKGKR+SLP +RIMIHQPLGG QG  TDIDI A E+L  +  LN  L  HTGQ  EKI ++T+RD+F+S  + K+
Sbjct:   16 ERSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKE 183          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STAES (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 98/168 (58.33%), Postives = 133/168 (79.17%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G  +DD++AN IV+QLL+L A D  KDI +Y+NSPGGSVTAG AI+DT++HI+PDV T+C+G+AASMG+FLL+AGAKGKR++LPN+ +MIHQPLGGAQG  T+I+I+AN +L  +  LN  L+  TGQS+EKI Q+TDRD F++  + K+
Sbjct:   15 ERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKE 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_STAEQ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 98/168 (58.33%), Postives = 133/168 (79.17%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G  +DD++AN IV+QLL+L A D  KDI +Y+NSPGGSVTAG AI+DT++HI+PDV T+C+G+AASMG+FLL+AGAKGKR++LPN+ +MIHQPLGGAQG  T+I+I+AN +L  +  LN  L+  TGQS+EKI Q+TDRD F++  + K+
Sbjct:   15 ERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKE 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_PSEPG (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas putida (strain GB-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 102/165 (61.82%), Postives = 130/165 (78.79%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + R+I   G V+D MAN++VAQ+L+L+A +P KDI +Y+NSPGGSVTAGM+I+DTM+ I+PDVST+C+G A SMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI I A E+L  KA LN  LAYHTGQ LE I ++T+RD F+S  +
Sbjct:   31 ERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKRHCLPNSRVMIHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSASR 195          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 97/168 (57.74%), Postives = 133/168 (79.17%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+  G  +DDD+AN+++AQLL+L++ DP KDI +Y+NSPGGSVT+G+AI+DTM++++P VST+C+G AASMGAFLL+ GA GKR+++PN+RIMIHQP+GG QG  TDIDI A E+L  KA LN  LA HT Q LE+I ++TDRDYF+   + K+
Sbjct:   17 ERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKE 184          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 101/165 (61.21%), Postives = 132/165 (80.00%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            ER   + S+L + RII  G  V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+AI+DTM+ + PD+ T+C GLAASMGAFLL+ G+KGKR +LPNSRIMIHQPLGGAQG   +I+I A E+L  K  LN  LA HTGQSLEKI+++TDRD+F+SP++
Sbjct:   37 ERAFDIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQE 201          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNP6 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.200e-53
Identity = 108/162 (66.67%), Postives = 126/162 (77.78%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + RII  G  V  D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV  G+ IFDTM HIRPDVSTVCVGLAASMGAFLL+AGAKGKR SL +SRIMIHQPLGGAQG   DI+I ANE+L+ K NLN  LA  TGQ L +I  +TDRD+F+S
Sbjct:   13 ERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMS 174          
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP1_GLOVI2.334e-5357.38ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_THEEB3.049e-5361.27ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_MACCJ3.981e-5359.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CARHZ3.981e-5359.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAES5.200e-5358.33ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAEQ5.200e-5358.33ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSEPG5.200e-5361.82ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANADF5.200e-5357.74ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMA5.200e-5361.21ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP1_SYNP65.200e-5366.67ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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