EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALTY (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhimurium GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALTI (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhi GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALSV (ATP-dependent Clp protease proteolytic subunit OS=Salmonella schwarzengrund (strain CVM19633) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALHS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella heidelberg (strain SL476) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALEP (ATP-dependent Clp protease proteolytic subunit OS=Salmonella enteritidis PT4 (strain P125109) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SALCH (ATP-dependent Clp protease proteolytic subunit OS=Salmonella choleraesuis GN=clpP PE=3 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/162 (61.11%), Postives = 131/162 (80.86%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AGAKGKR+ LPNSR+MIHQPLGG QG  TDI+I A E+L  K  +N  +A+HTGQSLE+I ++T+RD F+S
Sbjct:   28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLS 189
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURCM (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + R++   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ I+PDVST+C+GLAASMGAFLL++GAKGKR++LPNSR+MIHQPLGGA+G  +DI+I A E+L+ K  LN  LA HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + R++   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ I+PDVST+C+GLAASMGAFLL++GAKGKR++LPNSR+MIHQPLGGA+G  +DI+I A E+L+ K  LN  LA HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + R++   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ I+PDVST+C+GLAASMGAFLL++GAKGKR++LPNSR+MIHQPLGGA+G  +DI+I A E+L+ K  LN  LA HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAK 204
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SALTY1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALTI1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALSV1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALNS1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALHS1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALEP1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALCH1.158e-5261.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCM1.158e-5259.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCH1.158e-5259.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURCA1.158e-5259.28ATP-dependent Clp protease proteolytic subunit OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
back to top