EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMT (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.158e-52
Identity = 100/165 (60.61%), Postives = 132/165 (80.00%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKK 601
            +R   + S+L + RII  G  V+D +A+ +VAQ+L+L+A DP KDI +YVNSPGGSVTAG+AI+DTM+ + PDV T+C GLAASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG   +I+I A E+L+ K  LN  LA HTGQ+++KI+++TDRD+F+SP++
Sbjct:   13 DRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQE 177
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANOR (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANOP (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANOM (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANCP (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANCB (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris (strain B100) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANC8 (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris (strain 8004) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANC5 (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_XANAC (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas axonopodis pv. citri GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFIS 592
            ER   + S+L + R+I   G +DD MAN+IVAQLL+L+A +P KDI IY+NSPGG VTAGMAI+DTM++I+PDVST+CVG AASMGA LL++GA GKRY+LPNSR+MIHQPLGG QG  TDIDI A E+L  ++ LN  LA HTGQSLE I ++T+RD F S
Sbjct:   22 ERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKS 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURPS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP3_PROMT1.158e-5260.61ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP_XANOR1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOP1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOM1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANCP1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANCB1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANC81.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANC51.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANAC1.513e-5264.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURPS1.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
back to top