EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURP6 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 668) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   28 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 194
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURP0 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1106a) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURMS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain SAVP1) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURMA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   28 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 194
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURM9 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10229) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_BURM7 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10247) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.513e-52
Identity = 98/167 (58.68%), Postives = 136/167 (81.44%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+   G V+D  AN++VAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+DTM+ ++PDVST+C+GLAASMGAFLL++GAKGKRY+LPN+R+MIHQPLGGA+G  +DI+I A E+L+ +  LN  LA+HTGQ +E+I ++TDRD F+S +  K
Sbjct:   38 ERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAK 204
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_HELPY (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori GN=clpP PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/168 (58.93%), Postives = 135/168 (80.36%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+   G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G++I+DTM  IRPDVST+C+G AASMGAFLLS GAKGKR+SLP+SRIMIHQPLGGAQG  +DI+I +NE+L  K  +N  LA ++GQSLE+I ++TDRD+++S K+ K+
Sbjct:   16 ERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKE 183
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_HELPS (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori (strain Shi470) GN=clpP PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/168 (58.93%), Postives = 135/168 (80.36%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+   G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G++I+DTM  IRPDVST+C+G AASMGAFLLS GAKGKR+SLP+SRIMIHQPLGGAQG  +DI+I +NE+L  K  +N  LA ++GQSLE+I ++TDRD+++S K+ K+
Sbjct:   15 ERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKE 182
[Close]
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_HELPJ (ATP-dependent Clp protease proteolytic subunit OS=Helicobacter pylori J99 GN=clpP PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.976e-52
Identity = 99/168 (58.93%), Postives = 135/168 (80.36%), Query Frame = 2 
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RI+   G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G++I+DTM  IRPDVST+C+G AASMGAFLLS GAKGKR+SLP+SRIMIHQPLGGAQG  +DI+I +NE+L  K  +N  LA ++GQSLE+I ++TDRD+++S K+ K+
Sbjct:   15 ERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKE 182
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BURP61.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP11.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP01.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURMS1.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURMA1.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM91.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM71.513e-5258.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPY1.976e-5258.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPS1.976e-5258.93ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELPJ1.976e-5258.93ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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