CV884235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOCD_AZOVD (NADH-quinone oxidoreductase subunit C/D OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = -3 Query: 71 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 331 T I HF + G +PA+ ++ +EA KG +L S+GS YR +IR P +AHLQ + + + M+AD++ +G+ D V +VDR Sbjct: 507 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPSVIRGSMVADLIAYLGSIDFVMADVDR 593
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NDHH_SYNPW (NAD(P)H-quinone oxidoreductase subunit H OS=Synechococcus sp. (strain WH7803) GN=ndhH PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 71 FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 295 F +P YT +E+ KGE G+F+ N P+R KIRA +LQ L + K H +AD++ I+G+ D++ G VDR Sbjct: 320 FKIPNGELYTRLESGKGEIGIFIQGNNDVTPWRFKIRAADSNNLQILPHILKGHKVADIMAILGSIDVIMGSVDR 394
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NDHH_PAUCH (NAD(P)H-quinone oxidoreductase subunit H, organellar chromatophore OS=Paulinella chromatophora GN=ndhH PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = -3 Query: 71 PASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 286 P Y VE+ KGE GVF++SNG P+R KIRA F +LQ L + +ADV+ I+G+ D++ G VDR Sbjct: 335 PEGELYCRVESGKGELGVFIISNGEANPWRWKIRAADFNNLQILPHILTGAKVADVMAILGSIDVIMGSVDR 406
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_DESRM (NADH-quinone oxidoreductase subunit D OS=Desulfotomaculum reducens (strain MI-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = -3 Query: 74 PASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVD 286 P Y +E+ KG G ++VS+GS +PYR R P F +L L+ M + +ADV+ I+G+ DIV GEVD Sbjct: 295 PVGEAYAEIESSKGIMGTYVVSDGSTKPYRVHFRRPSFVNLGYLNEMLRGWKIADVIAILGSIDIVLGEVD 365
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOCD_PSEF5 (NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = -3 Query: 71 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 331 T I HF + G +PA+ ++ +EA KG +L S+G YR +IR P FAHLQ + + + M+AD++ +G+ D V +VDR Sbjct: 507 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFAHLQQIPSVIRGSMVADLIAYLGSIDFVMADVDR 593
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOCD_ARCB4 (NADH-quinone oxidoreductase subunit C/D OS=Arcobacter butzleri (strain RM4018) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 ++ F+L EG VP Y+ EA GE G F+VS+GS RPY+ K R P F L + + MLAD V + + + + GE DR Sbjct: 460 MNQFKLTFEGIQVPKGEYYSFSEAANGELGFFIVSDGSGRPYKVKCRPPCFYSLAAYSKIVEGTMLADAVVTMASMNFIAGEFDR 544
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NDHH_THEEB (NAD(P)H-quinone oxidoreductase subunit H OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhH PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = -3 Query: 71 FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 295 F +P Y VE+ KGE G++L+ + + P+R KIR P F +LQ L + K +AD+V I+G+ D++ G VDR Sbjct: 320 FKIPKGEHYVRVESGKGELGIYLIGDDNVFPWRWKIRPPDFNNLQVLPQLLKGMKVADIVAILGSIDVIMGSVDR 394 The following BLAST results are available for this feature:
BLAST of CV884235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 457
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884235 ID=CV884235; Name=CV884235; organism=Citrus sinensis; type=EST; length=468bpback to top |