CV884235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_GLUDA (NADH-quinone oxidoreductase subunit D OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=nuoD PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32 Identity = 61/85 (71.76%), Postives = 74/85 (87.06%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+L+TEG+ VP +TYTAVE+PKGEFGV+LV++GSNRPYRCKIR GFAHLQ +D MS+ HMLAD V IIG+ D+VFGE+DR Sbjct: 332 IHHFKLFTEGYHVPPGATYTAVESPKGEFGVYLVADGSNRPYRCKIRPTGFAHLQAIDEMSRRHMLADAVAIIGSLDLVFGEIDR 416
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD1_SINMW (NADH-quinone oxidoreductase subunit D 1 OS=Sinorhizobium medicae (strain WSM419) GN=nuoD1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+LYTEG+ VPA Y AVEAPKGEFGV+LVS+G+N+PYRCKIRAPG+AHLQ +DF+ + H LADV ++G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGDVYAAVEAPKGEFGVYLVSDGTNKPYRCKIRAPGYAHLQAMDFLCRGHQLADVSAVLGSLDIVFGEVDR 396
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD1_RHIME (NADH-quinone oxidoreductase subunit D 1 OS=Rhizobium meliloti GN=nuoD1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+LYTEG+ VPA Y AVEAPKGEFGV+LVS+G+N+PYRCKIRAPG+AHLQ +DF+ + H LADV ++G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGTNKPYRCKIRAPGYAHLQAMDFLCRGHQLADVSAVLGSLDIVFGEVDR 396
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_THIDA (NADH-quinone oxidoreductase subunit D OS=Thiobacillus denitrificans (strain ATCC 25259) GN=nuoD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.071e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+L+TEG VPA Y AVE PKGEFG++LVS+G+N+PYR KIRAPGFAHL+ LD MS+ HM+ADVV IIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGMHVPAGEAYAAVEHPKGEFGIYLVSDGANKPYRMKIRAPGFAHLEALDEMSRGHMIADVVAIIGTQDIVFGEIDR 417
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_BRUAB (NADH-quinone oxidoreductase subunit D OS=Brucella abortus GN=nuoD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.071e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+LYTEG+ VPA Y AVEAPKGEFGV+LVS+GSN+PYR K+RAPGFAHLQ +DF+ + HMLADV I+G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGSNKPYRFKLRAPGFAHLQAMDFLCRGHMLADVSAILGSLDIVFGEVDR 396
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_BRUA2 (NADH-quinone oxidoreductase subunit D OS=Brucella abortus (strain 2308) GN=nuoD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.071e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+LYTEG+ VPA Y AVEAPKGEFGV+LVS+GSN+PYR K+RAPGFAHLQ +DF+ + HMLADV I+G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGSNKPYRFKLRAPGFAHLQAMDFLCRGHMLADVSAILGSLDIVFGEVDR 396
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_BRUA1 (NADH-quinone oxidoreductase subunit D OS=Brucella abortus (strain S19) GN=nuoD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.071e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+LYTEG+ VPA Y AVEAPKGEFGV+LVS+GSN+PYR K+RAPGFAHLQ +DF+ + HMLADV I+G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGSNKPYRFKLRAPGFAHLQAMDFLCRGHMLADVSAILGSLDIVFGEVDR 396
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_NITMU (NADH-quinone oxidoreductase subunit D OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=nuoD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.929e-32 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+L+TEGF VP TY AVE PKGEFG++L+S+G+N PYR KIRAPGFAHL LD MS+ HM+ADVV IIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPPGETYAAVEHPKGEFGIYLISDGANMPYRMKIRAPGFAHLAALDEMSRGHMIADVVAIIGTQDIVFGEIDR 417
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_BURPS (NADH-quinone oxidoreductase subunit D OS=Burkholderia pseudomallei GN=nuoD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.929e-32 Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+L+TEGF VP TY AVE PKGEFG++LVS+G+N+PYR KIRAPG+AHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGETYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGYAHLSALDEMARGHMIADAVTIIGTQDIVFGEIDR 417
BLAST of CV884235 vs. ExPASy Swiss-Prot
Match: NUOD_BURP6 (NADH-quinone oxidoreductase subunit D OS=Burkholderia pseudomallei (strain 668) GN=nuoD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.929e-32 Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = -3 Query: 71 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 325 IHHF+L+TEGF VP TY AVE PKGEFG++LVS+G+N+PYR KIRAPG+AHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGETYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGYAHLSALDEMARGHMIADAVTIIGTQDIVFGEIDR 417 The following BLAST results are available for this feature:
BLAST of CV884235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 457
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884235 ID=CV884235; Name=CV884235; organism=Citrus sinensis; type=EST; length=468bpback to top |