CV884234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BURCC (NADH-quinone oxidoreductase subunit D OS=Burkholderia cenocepacia (strain MC0-3) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP Y AVE PKGEFG++LVS+G+N+PYR KIRAPGFAHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLASLDEMARGHMIADAVTIIGTQDIVFGEIDR 417
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BURCA (NADH-quinone oxidoreductase subunit D OS=Burkholderia cenocepacia (strain AU 1054) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP Y AVE PKGEFG++LVS+G+N+PYR KIRAPGFAHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLASLDEMARGHMIADAVTIIGTQDIVFGEIDR 417
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BURA4 (NADH-quinone oxidoreductase subunit D OS=Burkholderia ambifaria (strain MC40-6) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP Y AVE PKGEFG++LVS+G+N+PYR KIRAPGFAHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLASLDEMARGHMIADAVTIIGTQDIVFGEIDR 417
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BRASO (NADH-quinone oxidoreductase subunit D OS=Bradyrhizobium sp. (strain ORS278) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG VPA Y AVEAPKGEFGV+LV++G+N+PY+CKIRAPGFAHLQ +DF+ + H+LADV I+G+ DIVFGEVDR Sbjct: 314 IHHFKLYTEGVHVPAGEIYAAVEAPKGEFGVYLVADGTNKPYKCKIRAPGFAHLQAMDFLCRGHLLADVSAILGSLDIVFGEVDR 398
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BURP8 (NADH-quinone oxidoreductase subunit D OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.259e-31 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP Y AVE PKGEFG++LVS+G+N+PYR KIRAPG+AHL LD M++ HM+AD VTIIGTQDIVFGEVDR Sbjct: 333 IHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGYAHLSALDEMARGHMIADAVTIIGTQDIVFGEVDR 417
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BORPE (NADH-quinone oxidoreductase subunit D OS=Bordetella pertussis GN=nuoD PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.259e-31 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L++EGF VP Y AVE PKGEFG++LV++G+N+PYR KIRAPGFAHLQ LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 334 IHHFKLFSEGFHVPPGEAYAAVEHPKGEFGIYLVADGANKPYRLKIRAPGFAHLQSLDEMARGHMIADAVTIIGTQDIVFGEIDR 418
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BORPA (NADH-quinone oxidoreductase subunit D OS=Bordetella parapertussis GN=nuoD PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.259e-31 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L++EGF VP Y AVE PKGEFG++LV++G+N+PYR KIRAPGFAHLQ LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 334 IHHFKLFSEGFHVPPGEAYAAVEHPKGEFGIYLVADGANKPYRLKIRAPGFAHLQSLDEMARGHMIADAVTIIGTQDIVFGEIDR 418
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BORBR (NADH-quinone oxidoreductase subunit D OS=Bordetella bronchiseptica GN=nuoD PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.259e-31 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L++EGF VP Y AVE PKGEFG++LV++G+N+PYR KIRAPGFAHLQ LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 334 IHHFKLFSEGFHVPPGEAYAAVEHPKGEFGIYLVADGANKPYRLKIRAPGFAHLQSLDEMARGHMIADAVTIIGTQDIVFGEIDR 418
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_OLICO (NADH-quinone oxidoreductase subunit D OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.950e-31 Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG VP Y AVEAPKGEFGV+LV++G+N+PY+CKIRAPGFAHLQ +DF+ K H+LADV I+G+ DIVFGEVDR Sbjct: 321 IHHFKLYTEGVHVPPGEVYAAVEAPKGEFGVYLVADGTNKPYKCKIRAPGFAHLQAMDFICKGHLLADVSAILGSLDIVFGEVDR 405
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BURTA (NADH-quinone oxidoreductase subunit D OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=nuoD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.950e-31 Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP Y AVE PKGEFG++LVS+G+N+PYR KIRAPG+AHL LD M++ HM+AD VTIIGTQDIVFGE+DR Sbjct: 333 IHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGYAHLSALDEMARGHMIADAVTIIGTQDIVFGEIDR 417 The following BLAST results are available for this feature:
BLAST of CV884234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884234 ID=CV884234; Name=CV884234; organism=Citrus sinensis; type=EST; length=466bpback to top |