CV884234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NDUS2_CAFRO (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Cafeteria roenbergensis GN=NAD7 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.183e-34 Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+ +TEGF VPA TY AVEAPKGE GVFL+S+GSN+P+RCKI+APGF HLQ L M+KHHM+ADVVTIIGTQDIVFGEVDR Sbjct: 314 IHHFKYFTEGFKVPAGQTYAAVEAPKGEMGVFLISDGSNQPFRCKIKAPGFFHLQNLPEMTKHHMIADVVTIIGTQDIVFGEVDR 398
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NDUS2_ACACA (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Acanthamoeba castellanii GN=NAD7 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.183e-34 Identity = 65/85 (76.47%), Postives = 77/85 (90.59%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LY+EGF+VP + TY VEAPKGEFGV++VS+GSN+PYRCKI+APGF HLQ L+ MSK HM+ADVVTIIGTQDIVFGE+DR Sbjct: 317 IHHFKLYSEGFNVPENETYACVEAPKGEFGVYVVSDGSNKPYRCKIKAPGFLHLQSLNSMSKGHMIADVVTIIGTQDIVFGEIDR 401
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOCS (NADH-quinone oxidoreductase subunit D OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=nuoD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.851e-34 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG+ VPA TYTAVE+PKGEFGV+LVS+G+NRPYRCKIR GF+HLQ +DFMSK HMLAD V IIG+ DIVFGE+DR Sbjct: 314 IHHFKLYTEGYHVPAGETYTAVESPKGEFGVYLVSDGTNRPYRCKIRPTGFSHLQAMDFMSKGHMLADTVAIIGSMDIVFGEIDR 398
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPB (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisB18) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.351e-34 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VPA Y AVEAPKGEFGVFLVS+GSN+PY+CKIRAPGFAHLQ +DF+S+ H+LADV I+G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGFRVPAGEVYVAVEAPKGEFGVFLVSDGSNKPYKCKIRAPGFAHLQAMDFISRGHLLADVSAILGSLDIVFGEVDR 396
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RICPR (NADH-quinone oxidoreductase subunit D OS=Rickettsia prowazekii GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.083e-33 Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG+ VP TY AVEAPKGEFGV+L S G N+PYRC+I+APGFAHLQGL+FMSK H++ADV+TII T DIVFGE+DR Sbjct: 305 IHHFKLYTEGYDVPIGETYKAVEAPKGEFGVYLYSQGGNKPYRCRIKAPGFAHLQGLNFMSKGHLIADVITIIATLDIVFGEIDR 389
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPT (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain TIE-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.083e-33 Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VPA Y AVEAPKGEFGV+LVS+GSN+PY+CKIRAPGFAHLQ +DF+S+ H+LADV I+G+ DIVFGEVDR Sbjct: 318 IHHFKLYTEGFHVPAGEVYVAVEAPKGEFGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFLSRGHLLADVSAILGSLDIVFGEVDR 402
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPA (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.083e-33 Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VPA Y AVEAPKGEFGV+LVS+GSN+PY+CKIRAPGFAHLQ +DF+S+ H+LADV I+G+ DIVFGEVDR Sbjct: 318 IHHFKLYTEGFHVPAGEVYVAVEAPKGEFGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFLSRGHLLADVSAILGSLDIVFGEVDR 402
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_OCHA4 (NADH-quinone oxidoreductase subunit D OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.083e-33 Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 24 ITLGLERDGTGYIIGGADASFFL*IAGQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 + LG ER G + AD G+M IHHF+LYTEG+ VPA Y AVEAPKGEFGVFLVS+GSN+PYRCK+RAPGFAHLQ +DF+ + HMLADV I+G+ DIVFGEVDR Sbjct: 279 LLLGKERVGP---VSNADNKIVPPKRGEMKRSMEAL---IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVFLVSDGSNKPYRCKLRAPGFAHLQAMDFLCRGHMLADVSAILGSLDIVFGEVDR 396
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD1_RHIEC (NADH-quinone oxidoreductase subunit D 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=nuoD1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.415e-33 Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG+ VPA YTAVEAPKGEFGV+LVS+GSN+PYRCKIRAPG+AHLQ +DFM + H LADV ++G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYTAVEAPKGEFGVYLVSDGSNKPYRCKIRAPGYAHLQAMDFMCRGHQLADVAAVLGSLDIVFGEVDR 396
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RICCK (NADH-quinone oxidoreductase subunit D OS=Rickettsia canadensis (strain McKiel) GN=nuoD PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 1.848e-33 Identity = 63/85 (74.12%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG+ VPA TY AVEAPKGEFGV+L S G+N+PYRC+I+ PGFAHLQGL+FMSK H++ADV+TII T DIVFGE+DR Sbjct: 307 IHHFKLYTEGYEVPAGETYKAVEAPKGEFGVYLYSIGNNQPYRCRIKTPGFAHLQGLNFMSKGHLMADVITIIATLDIVFGEIDR 391 The following BLAST results are available for this feature:
BLAST of CV884234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884234 ID=CV884234; Name=CV884234; organism=Citrus sinensis; type=EST; length=466bpback to top |