CV884234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOCD_AZOVD (NADH-quinone oxidoreductase subunit C/D OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 3 Query: 135 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 T I HF + G +PA+ ++ +EA KG +L S+GS YR +IR P +AHLQ + + + M+AD++ +G+ D V +VDR Sbjct: 507 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPSVIRGSMVADLIAYLGSIDFVMADVDR 593
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NDHH_SYNPW (NAD(P)H-quinone oxidoreductase subunit H OS=Synechococcus sp. (strain WH7803) GN=ndhH PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 171 FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 F +P YT +E+ KGE G+F+ N P+R KIRA +LQ L + K H +AD++ I+G+ D++ G VDR Sbjct: 320 FKIPNGELYTRLESGKGEIGIFIQGNNDVTPWRFKIRAADSNNLQILPHILKGHKVADIMAILGSIDVIMGSVDR 394
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NDHH_PAUCH (NAD(P)H-quinone oxidoreductase subunit H, organellar chromatophore OS=Paulinella chromatophora GN=ndhH PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 180 PASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 P Y VE+ KGE GVF++SNG P+R KIRA F +LQ L + +ADV+ I+G+ D++ G VDR Sbjct: 335 PEGELYCRVESGKGELGVFIISNGEANPWRWKIRAADFNNLQILPHILTGAKVADVMAILGSIDVIMGSVDR 406
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_DESRM (NADH-quinone oxidoreductase subunit D OS=Desulfotomaculum reducens (strain MI-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 180 PASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVD 392 P Y +E+ KG G ++VS+GS +PYR R P F +L L+ M + +ADV+ I+G+ DIV GEVD Sbjct: 295 PVGEAYAEIESSKGIMGTYVVSDGSTKPYRVHFRRPSFVNLGYLNEMLRGWKIADVIAILGSIDIVLGEVD 365
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOCD_PSEF5 (NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 3 Query: 135 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 T I HF + G +PA+ ++ +EA KG +L S+G YR +IR P FAHLQ + + + M+AD++ +G+ D V +VDR Sbjct: 507 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFAHLQQIPSVIRGSMVADLIAYLGSIDFVMADVDR 593
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOCD_ARCB4 (NADH-quinone oxidoreductase subunit C/D OS=Arcobacter butzleri (strain RM4018) GN=nuoC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 ++ F+L EG VP Y+ EA GE G F+VS+GS RPY+ K R P F L + + MLAD V + + + + GE DR Sbjct: 460 MNQFKLTFEGIQVPKGEYYSFSEAANGELGFFIVSDGSGRPYKVKCRPPCFYSLAAYSKIVEGTMLADAVVTMASMNFIAGEFDR 544
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NDHH_THEEB (NAD(P)H-quinone oxidoreductase subunit H OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhH PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 3 Query: 171 FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 F +P Y VE+ KGE G++L+ + + P+R KIR P F +LQ L + K +AD+V I+G+ D++ G VDR Sbjct: 320 FKIPKGEHYVRVESGKGELGIYLIGDDNVFPWRWKIRPPDFNNLQVLPQLLKGMKVADIVAILGSIDVIMGSVDR 394
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_PELPB (NADH-quinone oxidoreductase subunit D OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.867e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 183 ASSTYTAVEAPKGEFGVFLVSNG-SNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 A Y E P+GE G +++S+G S +P RCK R+ F +L + +SK ++ D+V IIG+ DIV GEVDR Sbjct: 329 AGEVYARAENPRGELGFYIMSDGKSTKPLRCKARSSCFVNLSAMKDLSKGQLIPDLVAIIGSIDIVLGEVDR 400
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOCD_PSEFS (NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas fluorescens (strain SBW25) GN=nuoC PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.867e-11 Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 3 Query: 135 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 T I HF + G +PA+ ++ +EA KG +L S+G YR +IR P F HLQ + + K M+AD++ +G+ D V +VDR Sbjct: 508 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFPHLQQIPSVIKGEMVADLIAYLGSIDFVMADVDR 594 The following BLAST results are available for this feature:
BLAST of CV884234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884234 ID=CV884234; Name=CV884234; organism=Citrus sinensis; type=EST; length=466bpback to top |