CV884234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_THICR (NADH-quinone oxidoreductase subunit D OS=Thiomicrospira crunogena (strain XCL-2) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.043e-32 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEG+SVP +YTAVE PKGEFG+++VS+G+N+PYR K+RAPGFAHL LD M+K HM+ADVV IIGTQDIVFGEVDR Sbjct: 333 IHHFKLFTEGYSVPEGESYTAVEHPKGEFGIYMVSDGANKPYRLKVRAPGFAHLASLDEMAKGHMIADVVAIIGTQDIVFGEVDR 417
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPS (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisB5) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.043e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VP Y AVEAPKGEFGV+LVS+GSN+PY+CKIRAPGFAHLQ +DF+ + H+LADV I+G+ DIVFGEVDR Sbjct: 332 IHHFKLYTEGFRVPEGEVYVAVEAPKGEFGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFICRGHLLADVSAILGSLDIVFGEVDR 416
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_EHRCJ (NADH-quinone oxidoreductase subunit D OS=Ehrlichia canis (strain Jake) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.043e-32 Identity = 60/85 (70.59%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LY+EG+SVP TY AVEAPKGEFGV++VS+G+N+PYRC+IRAPGFAHLQ +D ++K HMLAD+ IIG+ DIVFGE+DR Sbjct: 309 IHHFKLYSEGYSVPVGETYMAVEAPKGEFGVYIVSDGTNKPYRCRIRAPGFAHLQAIDIIAKGHMLADLTAIIGSLDIVFGEIDR 393
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_AZOC5 (NADH-quinone oxidoreductase subunit D OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.668e-32 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VP Y AVEAPKGEFGV+LV +G+N+PYRCKIRAPGFAHLQ +DF+ + HMLADV ++G+ DIVFGEVDR Sbjct: 318 IHHFKLYTEGFHVPEGEVYAAVEAPKGEFGVYLVGDGTNKPYRCKIRAPGFAHLQSMDFLCRGHMLADVSAVLGSLDIVFGEVDR 402
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_AGRT5 (NADH-quinone oxidoreductase subunit D OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.668e-32 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG+ VPA Y AVEAPKGEFGV++V++GSN+PYRCKIRAPG+AHLQ +DF+ K H LADV ++G+ DIVFGEVDR Sbjct: 312 IHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYVVADGSNKPYRCKIRAPGYAHLQAMDFLCKGHQLADVTAVLGSLDIVFGEVDR 396
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOS4 (NADH-quinone oxidoreductase subunit D OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.485e-32 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 102 GQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 G+M T IHHF+LYTEGF VPA Y AVEAPKGEFGV+LV++G+NRPYR KIRAPGF HLQ +D+++K H+LADV IIGT D+VFGE+DR Sbjct: 310 GEMKTSMEAL---IHHFKLYTEGFHVPAGEVYAAVEAPKGEFGVYLVADGTNRPYRAKIRAPGFLHLQAIDYIAKGHLLADVSAIIGTLDVVFGEIDR 404
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOS1 (NADH-quinone oxidoreductase subunit D OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.485e-32 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 102 GQMTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 G+M T IHHF+LYTEGF VPA Y AVEAPKGEFGV+LV++G+NRPYR KIRAPGF HLQ +D+++K H+LADV IIGT D+VFGE+DR Sbjct: 308 GEMKTSMEAL---IHHFKLYTEGFHVPAGEVYAAVEAPKGEFGVYLVADGTNRPYRAKIRAPGFLHLQAIDYIAKGHLLADVSAIIGTLDVVFGEIDR 402
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHORT (NADH-quinone oxidoreductase subunit D OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.485e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+L+TEGF VP TYTAVEA GEFGV+LVS+G+NRPYRCKIR+PG+ HLQGLD MS+ HMLADVV IG+ D+VFGE+DR Sbjct: 308 IHHFKLFTEGFKVPEGETYTAVEAATGEFGVYLVSDGTNRPYRCKIRSPGYVHLQGLDLMSRGHMLADVVANIGSIDVVFGEIDR 392
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_BRASB (NADH-quinone oxidoreductase subunit D OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=nuoD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.485e-32 Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEG VPA Y AVEAPKGEFGV+LVS+GSN+PY+CKIRAPGFAHLQ +DF+ + H+LADV I+G+ DIVFGEVDR Sbjct: 314 IHHFKLYTEGVHVPAGEIYAAVEAPKGEFGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFLCRGHLLADVSAILGSLDIVFGEVDR 398
BLAST of CV884234 vs. ExPASy Swiss-Prot
Match: NUOD_RHOS5 (NADH-quinone oxidoreductase subunit D OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=nuoD PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.552e-32 Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 3 Query: 141 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 395 IHHF+LYTEGF VPA Y AVEAPKGEFGV+LV++G+NRPYR KIRAPGF HLQ +D+++K H+LADV IIGT D+VFGE+DR Sbjct: 318 IHHFKLYTEGFHVPAGEVYAAVEAPKGEFGVYLVADGTNRPYRAKIRAPGFLHLQAIDYIAKGHLLADVSAIIGTLDVVFGEIDR 402 The following BLAST results are available for this feature:
BLAST of CV884234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884234 ID=CV884234; Name=CV884234; organism=Citrus sinensis; type=EST; length=466bpback to top |