CV884217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENLA (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-19 Identity = 63/158 (39.87%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ S + V RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 53 ERASTQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-LSSVLISIQSL-MTENPYHNEPGFE----QERHSGDSKNYNE 201
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_DANRE (Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19 Identity = 62/158 (39.24%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ S + + RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 66 EKASQQCILRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-ISSVLISIQSL-MTENPYHNEPGFE----QERHPGDSKNYNE 214
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_RAT (Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus GN=Ube2z PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18 Identity = 61/158 (38.61%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ + + + RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 96 ERTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-ISSVLISIQSL-MTENPYHNEPGFE----QERHPGDSKNYNE 244
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_MOUSE (Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus GN=Ube2z PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18 Identity = 61/158 (38.61%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ + + + RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 96 ERTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-ISSVLISIQSL-MTENPYHNEPGFE----QERHPGDSKNYNE 244
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_HUMAN (Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18 Identity = 61/158 (38.61%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ + + + RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 94 ERTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-ISSVLISIQSL-MTENPYHNEPGFE----QERHPGDSKNYNE 242
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11 Identity = 47/143 (32.87%), Postives = 80/143 (55.94%), Query Frame = -3 Query: 496 SNKLVKRIQEEWKILENDLPDTIF---VRVYESRMDLLR--AVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPY--FNEPGWES 903 S+ ++R+QEE K D P + V+ + MDL + A I G EGT + G++ V +P++YP+ PP V + +G +PN+Y G +CLS+LN +++ W P++ T+ Q+++ +Q L+ + P EP W S Sbjct: 2 SSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG--FYHPNVYPSGTICLSILN-----EDQDWRPAI-TLKQIVLGVQDLLDSPNPNSPAQEPAWRS 136
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = -3 Query: 508 KRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEP 888 +R+ ++K L+ D P + E+ + + AVI G EGTP+ DG F + F +YPN PP V + S +PN+Y G +CL +L +W P+ + +L SIQ+L+ + P N P Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGSICLDIL-------QNRWSPTYD-VSSILTSIQSLL--DEPNPNSP 121
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = -3 Query: 508 KRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEP 888 +R+ ++K L+ D P + E+ + + AVI G EGTP+ DG F + F +YPN PP V + S +PN+Y G +CL +L +W P+ + +L SIQ+L+ + P N P Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVS--KMFHPNVYADGSICLDIL-------QNRWSPTYD-VSSILTSIQSLL--DEPNPNSP 121
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11 Identity = 46/144 (31.94%), Postives = 72/144 (50.00%), Query Frame = -3 Query: 460 KRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEP-GWESMDSMEEGERQSN 888 KR+ ++K L+ D P I +++ + L AVI G + TP+ G F + F DYPN PP V + S +PN+Y G +CL +L +W P + + +L SIQ+L+ + P N P E+ E +R+ N Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS--RMFHPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLLCDPNP--NSPANSEAARMYSENKREYN 138
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 523 VKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERP 891 V R++ E ++L + P + ES MD LRA I+G G+PY G+F ++ P YP PP + + + +PN+ + G++CL +L W P+++ + VL SIQ L+ P Sbjct: 4 VSRLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTP--IYHPNIDSAGRICLDILKL---PPKGAWRPALN-ISTVLTSIQLLMSEPNP 120 The following BLAST results are available for this feature:
BLAST of CV884217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884217 ID=CV884217; Name=CV884217; organism=Citrus sinensis; type=EST; length=920bpback to top |