CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 39/127 (30.71%), Postives = 71/127 (55.91%), Query Frame = -2 Query: 459 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQVTFHRKK--NLQYYEISAKSNYNFEKPFLYL 827 T+GV+ KIR WDTAGQE+F + YY + I+++D+T + T+ ++P W + + + E+ ++L GNK+D + +R++ +Q ++ ++ E SAK N+N ++ FL L Sbjct: 27 TVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKL 153
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = -2 Query: 468 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQV----TFHRKKNLQYYEISAKSNYNFEKPF 827 TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV TW ++L + NI ++L GNK D+ R + A Q +F K++L + E SA N E F Sbjct: 45 TIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL--RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAF 167
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 38/131 (29.01%), Postives = 67/131 (51.15%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV---KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIG++ + +I+ WDTAGQE+F + YY ++++DVT ++ N+ W R++ +N+ +L GNK D+ K AK + ++++E SAK+N N E+ F + R + Sbjct: 47 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDI 177
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RB27B_RAT (Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11 Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 474 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVD-VKNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 779 K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D + R+V +Q K + Y+E SA + N EK Sbjct: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLLDQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11 Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 441 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 827 TIG++ + +R WDTAGQE+F L Y AI+++D+T ++++ N W D+ N+ I+L GNK D+ + RQV ++ K+ ++ + E SAK+ +N + F +A L G Sbjct: 38 TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNKTDLADKRQVSIEEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASALPG 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: CPAS1_DICDI (Circularly permutated Ras protein 1 OS=Dictyostelium discoideum GN=cpras1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11 Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = -2 Query: 453 DTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNR----QVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 758 DTAGQE++ +RD Y G C +I+F + +R +++ V + + RV +++PI++ GNKVD+++R +++A Q+ R + Y E SAK+ N E+ F L R Sbjct: 62 DTAGQEEYSAMRDQYVRTGDCFMIVFSIDSRSSFEEVSQLKQHIERVKDRDDVPIIIVGNKVDLESRRQVSRIEADQLA--RSLRVPYIETSAKTRSNIEEAFFTLVR 167 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |