CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.832e-29 Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = -2 Query: 381 TIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTFH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 827 T+G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ V N PIV+C NK+D+KNRQ +K++ + KN +Y+EISAK+ +NF PFL+LAR G P+L FV + L P EV D Sbjct: 39 TVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLEPTEVNYD 191
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.609e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.114e-17 Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F + R Sbjct: 40 TIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVR 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.506e-15 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = -2 Query: 429 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYN----FEKPFLYLARKLAGDPNL 827 TIGVE N +I+ WDTAGQEKF + YY CA+I++D+T R +++++ +W D CR ++ VL GNK D++ NRQV + F K L ++E SAK+ N FEK + +KL +P L Sbjct: 56 TIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTD-CRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGL 195
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.473e-15 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = -2 Query: 447 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 779 KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 57 KIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |