CV884212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = -2 Query: 405 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 827 TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ V +W + +IP VL NK+D +KN + +A ++ L++Y S K + N + F YLA K E P L Sbjct: 41 TIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEA----LAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPEL 183
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = -2 Query: 405 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 827 TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T++++P W ++ + N+ I+L GNK D+ + R V + +K L E SAK + N E+ F+ +A++L +LH AL Sbjct: 49 TIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESAL 193
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = -2 Query: 435 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 827 TIGVE + + K+ WDTAGQEKF L YY I+ +DVT R ++ N+ W ++ N+ +L GNK+D +NR+V ++ F +KK + + E SAKS ++ F LA+K+ P Sbjct: 38 TIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK-NRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLAR 827 TIGVE N KI+ WDTAGQE+F + YY A++++D+T R+TY ++ TW D + N I+L GNK D++ R V ++ + K+N L + E SAK+ N E+ FL A+ Sbjct: 40 TIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAK 167
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 42/130 (32.31%), Postives = 75/130 (57.69%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 827 TIG++ + KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V K+K R+ ++++E SAK+N N EK FL LA + Sbjct: 41 TIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13 Identity = 42/133 (31.58%), Postives = 67/133 (50.38%), Query Frame = -2 Query: 453 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 827 TIG + + + + WDTAGQE+F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D++N++V K K N+ Y+E SAK N E+ F +AR Sbjct: 40 TIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAR 172
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 447 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK------NLQYYEISAKSNYNFEKPFLYLARKL 827 TIGV+ N I+ WDTAGQE+F + YY I+++DVT +LT++NV W +++ R CEN+ +L GNK D+ V K V F+ K + + E SAK + N E+ F+ +A ++ Sbjct: 40 TIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL----VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13 Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 429 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 827 TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + E SAK+ + F L K+ P L Sbjct: 40 TIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13 Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 429 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 827 TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + E SAK+ + F L K+ P L Sbjct: 40 TIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
BLAST of CV884212 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13 Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 429 TIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 827 TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + E SAK+ + F L K+ P L Sbjct: 40 TIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175 The following BLAST results are available for this feature:
BLAST of CV884212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884212 ID=CV884212; Name=CV884212; organism=Citrus sinensis; type=EST; length=828bpback to top |