CV884210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.391e-37 Identity = 71/158 (44.94%), Postives = 98/158 (62.03%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+Y+M+GF W A +FFW+L+ + SF+ FT YGMM VA+TP I +++S F +WNLFSGFLIPR +P+WW WYYWL PVAWTLYGL+ SQ GDI P + + M+VKQ +++ +G++ F + I NFQ+R Sbjct: 1270 IVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITE----PMADSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.285e-37 Identity = 74/158 (46.84%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 ++YSM+GF W +F W+L+ + + + FT YGMM V LTP I AI+S F ++WNLFSG+LIPR +IP+WWRWY W+ PVAWTLYGLV SQ GDI+ +E T TV Q + D FGF ++ F+ AI NFQRR Sbjct: 1297 LVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLE----GDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.016e-37 Identity = 72/158 (45.57%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+YS++GF W ++FFW+++ + +FM FT YGMM VA+TP I AI+S F +WN+F+GFLIPR +IPIWWRWY W PVAWTLYGLV SQ GDI + G V+ ++ FGF++D F +I + NFQRR Sbjct: 1291 IVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNSTLEDGE----VVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 9.016e-37 Identity = 69/158 (43.67%), Postives = 94/158 (59.49%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I YS+ F W A +F W+L+ + + + FT YGMM A+TP + I++ F +LWNLF GF+IPR +IP WWRWYYW +PV+WTLYGL+TSQ GD++ + + T T L+D FGF++D F LAI +NFQRR Sbjct: 1293 IFYSLGSFEWTAVKFLWYLFFMYFTLLYFTFYGMMTTAITPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAVDFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.538e-36 Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 ++YSM+GF W A +F W+++ + +F+ FT YGMM VA+TP I AI++ F ++WN+F+GF+IPR +IPIWWRWYYW PVAWTLYGLV SQ G+ + S TVK L+ GF++D F +I +NFQRR Sbjct: 1288 LVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTM----SDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.632e-36 Identity = 73/158 (46.20%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+Y+M+GF W A +FFW+L+ ++ + + FT YGMM V LTP I +I+S F ++WNLFSGF+IPR ++PIWWRWY W PVAWTLYGLV SQ GDIE +E VK +++ FGFK+ F AI NFQ+R Sbjct: 1305 IVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME-----DGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.632e-36 Identity = 73/158 (46.20%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+Y+M+GF W A +FFW+L+ ++ + + FT YGMM V LTP I +I+S F ++WNLFSGF+IPR ++PIWWRWY W PVAWTLYGLV SQ GDIE +E VK +++ FGFK+ F AI NFQ+R Sbjct: 1305 IVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME-----DGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.968e-36 Identity = 73/158 (46.20%), Postives = 96/158 (60.76%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+YSM+GF W A +FFW+L+ + +F+ FT YGMM V LTP+ + +I+S F +WNLFSGF+IPR ++PIWWRWY W+ PVAWTLYGLV SQ GDI P T VK +++ F FK+ F AI +NFQ+R Sbjct: 1312 IVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI----MTPMDDGT-PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.302e-35 Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+Y MM F W +FFWF Y+ +F+ FT YGMM V+++P Q+ +IL F +L+NLFSGF IPR +IP WW WYYWL PVAWT+YGL+ SQ GD+E + +PG + V+ +KD FG+ D + +I +NFQ+R Sbjct: 1353 IVYPMMSFQWTPAKFFWFFYVSFFTFLYFTYYGMMNVSVSPNLQVASILGAAFYTLFNLFSGFFIPRPKIPKWWVWYYWLCPVAWTVYGLIVSQYGDVEDFITVPGQ-SDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CV884210 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.455e-34 Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = -3 Query: 349 ILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLKDSFGFKYDXXXXXXXXXXXXXXXXXXXFTLAITLINFQRR 822 I+Y+MM F W A +FFWF ++ SF+ FT YGMM VA++P ++ AI + F SL+NLFSGF IPR +IP WW WYYWL P+AWT+YGL+ +Q GD+E + +PG + T+ + FG+ + + I +NFQ R Sbjct: 1344 IVYAMMSFQWTAAKFFWFFFVSYFSFLYFTYYGMMTVAISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIPKWWIWYYWLCPLAWTVYGLIVTQYGDLEQIISVPGQ-SNQTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500 The following BLAST results are available for this feature:
BLAST of CV884210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884210 ID=CV884210; Name=CV884210; organism=Citrus sinensis; type=EST; length=824bpback to top |