EY665243

Overview
NameEY665243
Unique NameEY665243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.612e-76
Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF  CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV IGQVLLSVRCK +N+ HA EAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.612e-76
Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF  CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVL INKMLSCAGADRLQTGMRGAF KPQGTCARV IGQVLLSVRCK +N+ HA EAL
Sbjct:    1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_RAT (60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PONAB (60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
[Close]
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152
The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL102_ORYSJ2.612e-7690.7960S ribosomal protein L10-2 OS=Oryza sativa subsp.... [more]
RL102_ORYSI2.612e-7690.7960S ribosomal protein L10-2 OS=Oryza sativa subsp.... [more]
RL10_SHEEP6.907e-6175.0060S ribosomal protein L10 OS=Ovis aries GN=RPL10 P... [more]
RL10_RAT6.907e-6175.0060S ribosomal protein L10 OS=Rattus norvegicus GN=... [more]
RL10_PONAB6.907e-6175.0060S ribosomal protein L10 OS=Pongo abelii GN=RPL10... [more]
RL10_PIG6.907e-6175.0060S ribosomal protein L10 OS=Sus scrofa GN=RPL10 P... [more]
RL10_PAPAN6.907e-6175.0060S ribosomal protein L10 OS=Papio anubis GN=RPL10... [more]
RL10_MOUSE6.907e-6175.0060S ribosomal protein L10 OS=Mus musculus GN=Rpl10... [more]
RL10_HUMAN6.907e-6175.0060S ribosomal protein L10 OS=Homo sapiens GN=RPL10... [more]
RL10_BOVIN6.907e-6175.0060S ribosomal protein L10 OS=Bos taurus GN=RPL10 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bp
AGCTGAGACCGAACACGAACGCTCGCCATGGGAAGAAGACCGGCAAGGTG
TTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTTTGCCGCG
GTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAAGAAGAAA
GGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGGAGAAGGA
GAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGCAACAAGT
ACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGTGAGGGTG
CACCCCTTCCATGTTCTGCTCATTAACAAGATGCTTTCGTGTGCTGGGGC
TGATCGGCTCCAGACTGGAATGAGGGGTGCTTTTTGAAAGCCCCAAGGAA
CCTGTGCTCGTGTTGCTATCGGGCAGGTCTTGCTTTCTGTCCGTTGCAAG
GACAGTAACAGCCACCATGCTCAGGAGGCCCTTTCGCCGTGCTAATTTCA
GGTTTCCCTGGTCGTCAAAAAATTATTGGTCCGCAGGAAAGGGGGATTTA
CCCAGTTCCGCCCTGGCTGGATTTTCAGAAGGTGGAATACGGAAAAACGG
AATGGTCCCAAATGGGGGGGAAGGCCACGTTTTCTCGGAGGTCTGGGGCC
TTTGGGGCTACAGCCCACACTAGAAAAAATTTTCCGGGAAAACAAAAACC
AAGAAAATTAAAAGGACCCAAAAAAAGCAAGAAAATGGACAATCTGGTAA
GAGTTTAAAGTTTCCCCCTTCACAGAACTTATCCCTCCGTGAACAGGGAA
ATCTCACATAGTTAAGACAGAAACGGAATCATTTAGGGGTTTTAAAAAAC
AATAAAAACCATGTAAGAATAAAATTATAATAAAAAAAATAATAGGAATC
CACGAACACATAGAACATAGAAGTGGATCTTGTGGTGAATGGTATTTTAT
TTTAGTATTAAAGAAAAAAATAAAGAACTATGAA
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