EY665243

Overview
NameEY665243
Unique NameEY665243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.907e-61
Identity = 114/152 (75.00%), Postives = 124/152 (81.58%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_DROME (60S ribosomal protein L10 OS=Drosophila melanogaster GN=Qm PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 9.020e-61
Identity = 112/152 (73.68%), Postives = 124/152 (81.58%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPDPKIRI+D+G KK  V++FP CVHLVS E E +SSEALEA RI CNKY+ KY GKD FH+R+R+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQ ++SVR  D       EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.539e-60
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 7.636e-60
Identity = 111/152 (73.03%), Postives = 123/152 (80.92%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPDPKIRI+D+G K+  VD+FP CVHLVS E E +SSEALEA RI CNKY+ K  GKD FH+R+R+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQ ++SVR  D       EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.701e-59
Identity = 113/152 (74.34%), Postives = 123/152 (80.92%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPAR YR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 2.902e-59
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPY KSR+CRGVPD KIRI+D+G KK   DEFP CVHL+S EKE +SSEA+EA RI+CNKY++K  GKD+FH+RVRVHP+HVL INKMLSCAGADRLQTGMRGAF KP GT ARV IGQ++ S+R +D+   +  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.902e-59
Identity = 111/151 (73.51%), Postives = 123/151 (81.46%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEA 480
            MGRRPARCYR IKNKPYPKSRFCRGVPD KIRI+D+G K+  VD FP CVH++S E+E++SSEALEAARI  NKYM K  GKD FHLRVR HPFHV  INKMLSCAGADRLQTGMRGA+ KPQG  ARV IG +L S+R K+ N  HA EA
Sbjct:    1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEA 151          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3)

HSP 1 Score: 228.794 bits (582), Expect = 3.790e-59
Identity = 112/152 (73.68%), Postives = 123/152 (80.92%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP   H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV IGQV++S+R K  N  H  EAL
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEAL 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_CHICK (60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 4.190e-58
Identity = 108/146 (73.97%), Postives = 119/146 (81.51%), Query Frame = 1
Query:   46 RCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            RCYR  KNKPYPKSRFCRGVPDPKIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+ INKMLSCAGADRLQTGMRGAF KPQGT ARV +GQV++S+R K  N  H  EAL
Sbjct:    2 RCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHMGQVIMSIRTKAQNKEHVVEAL 147          
The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10L_MOUSE6.907e-6175.0060S ribosomal protein L10-like OS=Mus musculus GN=... [more]
RL10L_BOVIN6.907e-6175.0060S ribosomal protein L10-like OS=Bos taurus GN=RP... [more]
RL10_DROME9.020e-6173.6860S ribosomal protein L10 OS=Drosophila melanogast... [more]
RL10L_MACFA1.539e-6074.3460S ribosomal protein L10-like OS=Macaca fascicula... [more]
RL10_BOMMA7.636e-6073.0360S ribosomal protein L10 OS=Bombyx mandarina GN=R... [more]
RL10_MACFA1.701e-5974.3460S ribosomal protein L10 OS=Macaca fascicularis G... [more]
RL10_DICDI2.902e-5971.0560S ribosomal protein L10 OS=Dictyostelium discoid... [more]
RL10_CAEEL2.902e-5973.5160S ribosomal protein L10 OS=Caenorhabditis elegan... [more]
RL10L_HUMAN3.790e-5973.6860S ribosomal protein L10-like OS=Homo sapiens GN=... [more]
RL10_CHICK4.190e-5873.9760S ribosomal protein L10 (Fragment) OS=Gallus gal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bp
AGCTGAGACCGAACACGAACGCTCGCCATGGGAAGAAGACCGGCAAGGTG
TTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTTTGCCGCG
GTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAAGAAGAAA
GGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGGAGAAGGA
GAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGCAACAAGT
ACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGTGAGGGTG
CACCCCTTCCATGTTCTGCTCATTAACAAGATGCTTTCGTGTGCTGGGGC
TGATCGGCTCCAGACTGGAATGAGGGGTGCTTTTTGAAAGCCCCAAGGAA
CCTGTGCTCGTGTTGCTATCGGGCAGGTCTTGCTTTCTGTCCGTTGCAAG
GACAGTAACAGCCACCATGCTCAGGAGGCCCTTTCGCCGTGCTAATTTCA
GGTTTCCCTGGTCGTCAAAAAATTATTGGTCCGCAGGAAAGGGGGATTTA
CCCAGTTCCGCCCTGGCTGGATTTTCAGAAGGTGGAATACGGAAAAACGG
AATGGTCCCAAATGGGGGGGAAGGCCACGTTTTCTCGGAGGTCTGGGGCC
TTTGGGGCTACAGCCCACACTAGAAAAAATTTTCCGGGAAAACAAAAACC
AAGAAAATTAAAAGGACCCAAAAAAAGCAAGAAAATGGACAATCTGGTAA
GAGTTTAAAGTTTCCCCCTTCACAGAACTTATCCCTCCGTGAACAGGGAA
ATCTCACATAGTTAAGACAGAAACGGAATCATTTAGGGGTTTTAAAAAAC
AATAAAAACCATGTAAGAATAAAATTATAATAAAAAAAATAATAGGAATC
CACGAACACATAGAACATAGAAGTGGATCTTGTGGTGAATGGTATTTTAT
TTTAGTATTAAAGAAAAAAATAAAGAACTATGAA
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