EY665243

Overview
NameEY665243
Unique NameEY665243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METM7 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.351e-23
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC 492
            M  RPARCYR  + + Y +  + R VP PK+  Y +G       EFP  V L+S     +   ALE++RIA NKY+ +  G+  +   +RV+P  +L  NKM + AGADR+  GMR +F K  GT A+V  GQ ++++       + A+EAL  C
Sbjct:    1 MALRPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRC 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METM6 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.351e-23
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC 492
            M  RPARCYR  + + Y +  + R VP PK+  Y +G       EFP  V L+S     +   ALE++RIA NKY+ +  G+  +   +RV+P  +L  NKM + AGADR+  GMR +F K  GT A+V  GQ ++++       + A+EAL  C
Sbjct:    1 MALRPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRC 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.465e-23
Identity = 63/152 (41.45%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M  RP RCYR     PY +  + +  P   I  +D+G  K     F   + LV      + + ALEAAR   NKY+    G+  F LRV V P H+L  NKM++ AGADRLQ GMR +F  P G  ARV  GQ+++ V+    N  HA+EAL
Sbjct:    1 MPLRPGRCYRHFGTPPYTRLEYIKSNPPVLIPKFDLGNPK---GNFNTVLKLVVMRPGQIRANALEAARQHANKYLTAKVGEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSFGTPVGRAARVEAGQIVMLVKVDAKNIDHAKEAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METM5 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.465e-23
Identity = 61/155 (39.35%), Postives = 86/155 (55.48%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALSPC 492
            M  RPARCYR  + + Y +  + R VP PK+  Y +G       EFP  V LVS     +   ALE++RIA NKY+    G+  +   +RV+P  +L  NKM + AGADR+  GMR +F K  GT A+V  GQ ++++       + A+EAL  C
Sbjct:    1 MALRPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLVSKSDILIRHNALESSRIAGNKYIMGECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPERFYAAKEALRRC 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.750e-23
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M  +PAR Y +I    Y +  F  GVP PKI  +  G +KK   +FP  + LV+ E   +   ALEAAR++ N+ M + AG D F+L+V  +P HVL  +KM + AGADR+ +GMR AF +P GT ARV    V++  R  ++++   + AL
Sbjct:    1 MVTKPARMYSRITGPAYTRKEFMGGVPYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMIARTDEAHAKELKTAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_CALMQ (50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.705e-22
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKK-KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALS 486
            M  RPARCY++IK +PY + ++  G P  +I  +++G  K K  + F     L   E   +   ALEAAR    KY++K      F+L++  +P HV+  NKML+ AGADRLQ GMR AF  P G   ++  G+VL+ V  +D N  HA+EAL+
Sbjct:    1 MPLRPARCYKRIK-RPYTRLKYIHGAPYVQIPRFEMGATKAKDRERFTSVAVLRVLEGGQIRVNALEAARQMAYKYLSKVLTDQNFYLKIIKYPHHVIRENKMLAMAGADRLQEGMRLAFGVPTGRAIQIEPGEVLMIVEVEDRNITHAKEALN 153          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METS5 (50S ribosomal protein L10e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.320e-22
Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVA-IGQVLLSVRCKDSNSHHAQEA 480
            M  RP RCYR      Y +  +  GVP PKI  + +G  KK  D   F V L++ +   +   ALEAAR+   K M    G +  F+L V  +P HV+  NKM++ AGADRLQ GMR +F KP GT AR+  +G +++++R K  +   A++A
Sbjct:    1 MPLRPGRCYRHFSGPAYTRKEYIPGVPQPKITKFTMGDHKKDYD---FEVRLLTKQIGQIRHNALEAARVIALKQMTSMVGNETDFYLYVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARITKLGDLIMAIRVKKEHLEFAKKA 150          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+P   YR ++ + + + ++  GVP  ++  YD+G K      FP  + LV+ EK  +   ALEAARI  N+++   AGK  F++++RV+P  VL  NK  + AGADR+ +GMR AF K  GT ARV   Q L +V  +  N   A++AL
Sbjct:    1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTT--FPVKISLVAEEKCQIRHTALEAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNSMQKLFTVAVEKQNFPAAKKAL 150          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.078e-21
Identity = 60/152 (39.47%), Postives = 87/152 (57.24%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+PAR YR +  K Y +  +  GVP  K+  +D+G      ++FP  +HL + E   +   A+EAARI  N+ + K  G++ FHL++R +P HVL  +K  + AGADR+  GMR AF K  GT ARVA  Q + +V         A++AL
Sbjct:    1 MVRKPARMYRNLAKKAYCRREYMGGVPGLKVVQFDMGNLS---EDFPVAIHLEALEACQIRHTAMEAARINMNRRLMKTVGRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKAVGTAARVAPRQRVFTVWTTPQYVDQAKDAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_UNCMA (50S ribosomal protein L10e OS=Uncultured methanogenic archaeon RC-I GN=rpl10e PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.839e-21
Identity = 59/152 (38.82%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+P R Y++     Y +  +  GVP  K+  +D+G      +E P  V LV  E   +  +ALEAARI+ N+Y+    GK  +  +VRV+P  VL  NK  + AGADR+  GMR AF K  GT ARV  GQ + ++    +N   A+EA+
Sbjct:    1 MARKPGRMYKKFSGPAYTRREYMGGVPGVKVAQFDMGNL---TEELPIAVTLVVNETCQIRHDALEAARISANRYLLNDVGKTNYRFKVRVYPHQVLRENKQATGAGADRVSDGMRRAFGKAVGTAARVYEGQGVFTIWVNRANFEKAKEAM 149          
The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_METM73.351e-2338.7150S ribosomal protein L10e OS=Methanococcus maripa... [more]
RL10_METM63.351e-2338.7150S ribosomal protein L10e OS=Methanococcus maripa... [more]
RL10_THEPD7.465e-2341.4550S ribosomal protein L10e OS=Thermofilum pendens ... [more]
RL10_METM57.465e-2339.3550S ribosomal protein L10e OS=Methanococcus maripa... [more]
RL10_THEAC9.750e-2340.7950S ribosomal protein L10e OS=Thermoplasma acidoph... [more]
RL10_CALMQ3.705e-2240.9150S ribosomal protein L10e OS=Caldivirga maquiling... [more]
RL10_METS56.320e-2239.8750S ribosomal protein L10e OS=Metallosphaera sedul... [more]
RL10_METMA1.078e-2139.4750S ribosomal protein L10e OS=Methanosarcina mazei... [more]
RL10_METLZ1.078e-2139.4750S ribosomal protein L10e OS=Methanocorpusculum l... [more]
RL10_UNCMA1.839e-2138.8250S ribosomal protein L10e OS=Uncultured methanoge... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bp
AGCTGAGACCGAACACGAACGCTCGCCATGGGAAGAAGACCGGCAAGGTG
TTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTTTGCCGCG
GTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAAGAAGAAA
GGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGGAGAAGGA
GAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGCAACAAGT
ACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGTGAGGGTG
CACCCCTTCCATGTTCTGCTCATTAACAAGATGCTTTCGTGTGCTGGGGC
TGATCGGCTCCAGACTGGAATGAGGGGTGCTTTTTGAAAGCCCCAAGGAA
CCTGTGCTCGTGTTGCTATCGGGCAGGTCTTGCTTTCTGTCCGTTGCAAG
GACAGTAACAGCCACCATGCTCAGGAGGCCCTTTCGCCGTGCTAATTTCA
GGTTTCCCTGGTCGTCAAAAAATTATTGGTCCGCAGGAAAGGGGGATTTA
CCCAGTTCCGCCCTGGCTGGATTTTCAGAAGGTGGAATACGGAAAAACGG
AATGGTCCCAAATGGGGGGGAAGGCCACGTTTTCTCGGAGGTCTGGGGCC
TTTGGGGCTACAGCCCACACTAGAAAAAATTTTCCGGGAAAACAAAAACC
AAGAAAATTAAAAGGACCCAAAAAAAGCAAGAAAATGGACAATCTGGTAA
GAGTTTAAAGTTTCCCCCTTCACAGAACTTATCCCTCCGTGAACAGGGAA
ATCTCACATAGTTAAGACAGAAACGGAATCATTTAGGGGTTTTAAAAAAC
AATAAAAACCATGTAAGAATAAAATTATAATAAAAAAAATAATAGGAATC
CACGAACACATAGAACATAGAAGTGGATCTTGTGGTGAATGGTATTTTAT
TTTAGTATTAAAGAAAAAAATAAAGAACTATGAA
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