EY665243

Overview
NameEY665243
Unique NameEY665243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_SULAC (50S ribosomal protein L10e OS=Sulfolobus acidocaldarius GN=rpl10e PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.401e-21
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAK-YAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARV-AIGQVLLSVRCKDSNSHHAQEAL 483
            M  RP RCYR+     Y +  +  G+P PKI  + +G       ++ + + L++ EK  +   ALEAAR+   KY++K  A +  F L V  +P HV+  NKM++ AGADRLQ GMR +F KP GT AR+  +G++++ VR K  +   A+EAL
Sbjct:    1 MPLRPGRCYRKFSGPAYTRREYIPGIPMPKITKFVMGNVN---GDYDYELRLITTEKGQIRHNALEAARVIALKYLSKKLASEQNFALVVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARLEKLGELVMYVRVKKEHLEAAKEAL 151          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_PICTO (50S ribosomal protein L10e OS=Picrophilus torridus GN=rpl10e PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.350e-21
Identity = 59/152 (38.82%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M  +PAR Y +I    Y +  F  GVP PKI  +  G +KK   +F   + LV+ E   +   ALEAAR++ N+ +   AG D + L++R +P  V+  +KM + AGADR+ +GMR AF +P GT ARV  GQ+++  R   +N+   ++AL
Sbjct:    1 MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFIQGNQKK---DFEIEMMLVAEEACQIRHTALEAARVSVNRKLLDAAGSDNYFLQIRPYPHQVIREHKMATGAGADRISSGMRAAFGRPVGTAARVYPGQIIMVGRVDRNNAKLLKDAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METAC (50S ribosomal protein L10e OS=Methanosarcina acetivorans GN=rpl10e PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.350e-21
Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+P   YR ++ + + + ++  GVP  ++  YD+G K      FP  + L+  EK  +   ALEAARI  N+++    GK  F++++RV+P  V+  NK  + AGADR+ +GMR AF K  GT ARV   Q + +V  +  N   A+EAL
Sbjct:    1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEAL 150          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.987e-21
Identity = 55/152 (36.18%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+PA  YR +K++ + + ++  GVP  ++  +D+G K     +FP  + L++ E+  +   ALEAARI  N+ M   AG+  FH+++RV+P  VL  NK  + AGADR+ +GMR A+ K   T ARV+  Q + ++     +   A++AL
Sbjct:    1 MVRKPASMYRNVKSRSFTRRKYMGGVPGSQVIHFDMGNKTA---DFPVKITLLADERCQIRHTALEAARITANRAMTTAAGRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKNVSTAARVSARQKIFTISVNKEHFIIAKDAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.557e-20
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSV 441
            M R+PA+ YR +  K Y +  +  GVP  KI  +D+G      +++P  + +V  E   +   ALEAARI  N+ + K  G+  FHL++R  P HVL  NK  + AGADR+  GMR AF K  GT ARV  GQ + SV
Sbjct:    1 MVRKPAKMYRNLAKKAYTRREYMGGVPGSKIVQFDMGNL---TEDYPVELSIVVDETCQIRHTALEAARIGINRQLQKEVGRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEKGQKVFSV 135          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.033e-20
Identity = 58/152 (38.16%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            MG RPA+  R +    Y +  + RG P PKI I+D+G       EF + V L + +   +   ALEA RI  N+Y+ K  G+  +H ++RV+PF VL  N M +   ADR   GMR  F KP G  ARV   Q +L+V   + +   A EA+
Sbjct:    1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFQYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAM 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_HALMA (50S ribosomal protein L10e OS=Haloarcula marismortui GN=rpl10e PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.033e-20
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEA 480
            M  +PA  YR I    Y +  +  G+P  KI  + +G K+K  D++P  + L+  E   +   +LEA+R++ N+++ K  G++  + + +R  P  VL  NK  + AGADR+  GMR AF K  GT ARV  G+ L +  C   ++ H +EA
Sbjct:    1 MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEA 152          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_THESM (50S ribosomal protein L10e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.468e-20
Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALS 486
            M  RPA+  R +    Y +  + RG P P+I I+D+G       +F F V L + E   +   ALEAAR   N+Y++K  G+  FH ++RV+PF VL  N M +   ADR   GMR  F KP G  AR+   Q +L+VR    N  H + AL+
Sbjct:    1 MALRPAKIDRYVDKPAYTRREYIRGAPGPRITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARTQLNRYLSKNVGRSNFHYKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILTVRV---NKQHLKFALA 147          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METPE (50S ribosomal protein L10e OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.529e-20
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+P + YR +  K Y + ++  GVP  KI  +++G   +   EFP  + L   E   +   ALEAARIA N+ M    G+  FH ++R +P HVL  NK  + AGADR+  GMR AF K  GT ARV   Q + +V   +     +++AL
Sbjct:    1 MVRKPGKMYRNLAKKAYTRRKYMGGVPGSKIVQFEMGNLSQ---EFPVEISLEVLESCQIRHTALEAARIAINRKMMDQVGRANFHFKIRTYPHHVLRENKQATGAGADRVSEGMRMAFGKAVGTAARVQPKQKVFTVYTNEQYIEKSKDAL 149          
BLAST of EY665243 vs. ExPASy Swiss-Prot
Match: RL10_METBF (50S ribosomal protein L10e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.725e-20
Identity = 56/152 (36.84%), Postives = 88/152 (57.89%), Query Frame = 1
Query:   28 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLLINKMLSCAGADRLQTGMRGAF*KPQGTCARVAIGQVLLSVRCKDSNSHHAQEAL 483
            M R+P   YR ++ + + + ++  GVP  ++  YD+G K      FP  + L+  EK  +   ALEAARI  N+++ +  GK  +++++RV+P  VL  NK  + AGADR+ +GMR AF K  GT ARV   Q + +V  +  N   A++AL
Sbjct:    1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPIKLSLLVEEKCQIRHTALEAARITANRHLIEDTGKMGYYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNPFQKIFTVAVEKQNFVAAKKAL 150          
The following BLAST results are available for this feature:
BLAST of EY665243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_SULAC2.401e-2139.6150S ribosomal protein L10e OS=Sulfolobus acidocald... [more]
RL10_PICTO5.350e-2138.8250S ribosomal protein L10e OS=Picrophilus torridus... [more]
RL10_METAC5.350e-2137.5050S ribosomal protein L10e OS=Methanosarcina aceti... [more]
RL10_METBU6.987e-2136.1850S ribosomal protein L10e OS=Methanococcoides bur... [more]
RL10_METMJ1.557e-2042.0350S ribosomal protein L10e OS=Methanoculleus maris... [more]
RL10_THEON2.033e-2038.1650S ribosomal protein L10e OS=Thermococcus onnurin... [more]
RL10_HALMA2.033e-2034.8750S ribosomal protein L10e OS=Haloarcula marismort... [more]
RL10_THESM3.468e-2038.5650S ribosomal protein L10e OS=Thermococcus sibiric... [more]
RL10_METPE4.529e-2038.1650S ribosomal protein L10e OS=Methanosphaerula pal... [more]
RL10_METBF7.725e-2036.8450S ribosomal protein L10e OS=Methanosarcina barke... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665243 ID=EY665243; Name=EY665243; organism=Citrus sinensis; type=EST; length=984bp
AGCTGAGACCGAACACGAACGCTCGCCATGGGAAGAAGACCGGCAAGGTG
TTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTTTGCCGCG
GTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAAGAAGAAA
GGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGGAGAAGGA
GAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGCAACAAGT
ACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGTGAGGGTG
CACCCCTTCCATGTTCTGCTCATTAACAAGATGCTTTCGTGTGCTGGGGC
TGATCGGCTCCAGACTGGAATGAGGGGTGCTTTTTGAAAGCCCCAAGGAA
CCTGTGCTCGTGTTGCTATCGGGCAGGTCTTGCTTTCTGTCCGTTGCAAG
GACAGTAACAGCCACCATGCTCAGGAGGCCCTTTCGCCGTGCTAATTTCA
GGTTTCCCTGGTCGTCAAAAAATTATTGGTCCGCAGGAAAGGGGGATTTA
CCCAGTTCCGCCCTGGCTGGATTTTCAGAAGGTGGAATACGGAAAAACGG
AATGGTCCCAAATGGGGGGGAAGGCCACGTTTTCTCGGAGGTCTGGGGCC
TTTGGGGCTACAGCCCACACTAGAAAAAATTTTCCGGGAAAACAAAAACC
AAGAAAATTAAAAGGACCCAAAAAAAGCAAGAAAATGGACAATCTGGTAA
GAGTTTAAAGTTTCCCCCTTCACAGAACTTATCCCTCCGTGAACAGGGAA
ATCTCACATAGTTAAGACAGAAACGGAATCATTTAGGGGTTTTAAAAAAC
AATAAAAACCATGTAAGAATAAAATTATAATAAAAAAAATAATAGGAATC
CACGAACACATAGAACATAGAAGTGGATCTTGTGGTGAATGGTATTTTAT
TTTAGTATTAAAGAAAAAAATAAAGAACTATGAA
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