DY257693

Overview
NameDY257693
Unique NameDY257693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length358
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.423e-17
Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            KLS EKAIFIFVD VLPPT A+MS+IYEE KD+DGFLY+TYSGENTFG+
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFGN 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct:   70 KLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLSAEKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTFG
Sbjct:   70 KLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   70 KLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct:   70 KLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            KLS EKAIF+FV N LPPT ++MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:   70 KLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.165e-17
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 149
            KLS EKAIF+FV N LPPT ++MSAIYEE KDEDGFLY+TYSGENTFGS
Sbjct:   70 KLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.133e-17
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY++YSGENTFG
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.133e-17
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIP 158
            KLS EKAIFIF+D +LPPT A+MS IYEE K EDGFLY+TYSGENTFG+  P
Sbjct:   69 KLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFGTVFP 120          
BLAST of DY257693 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.133e-17
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 146
            KLS EKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY++YSGENTFG
Sbjct:   69 KLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of DY257693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ATG8_COCIM2.423e-1781.63Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8D_ARATH3.165e-1785.42Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8C_ARATH3.165e-1783.33Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ3.165e-1785.42Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI3.165e-1785.42Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ORYSJ3.165e-1781.63Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI3.165e-1781.63Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8_SCLS14.133e-1783.33Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_SCHPO4.133e-1775.00Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_BOTFB4.133e-1783.33Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DF06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257693 ID=DY257693; Name=DY257693; organism=Citrus sinensis; type=EST; length=358bp
TCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGATAATGTGCTC
CCACCTACAGGTGCAATTATGTCTGCCATATACGAAGAGAAAAAGGATGA
AGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACATTTGGAAGCC
ACATCCCAGTTTAGCCTTGTGATTATCTATCTGCTCATTGTGTGGTTTCT
TGTGCGACCACATTTTTATCTCAATTATCATCCTTGCTTTCCGCTGAATA
TTCCTTTATCGGGCATATTTTATATTTTATAAAGACATTGCCAGTGATAA
TATGTACAGTTACCTATTGTATATAAGTCTTAAAGGCATAATATGTCAAA
TTTCTTTC
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